Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19730

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
2,047,320	-		PGA1_c19710	0.77	+0.6
2,047,320	-		PGA1_c19710	0.77	-0.1
2,047,320	-		PGA1_c19710	0.77	-0.3
2,047,320	-		PGA1_c19710	0.77	+0.2
2,047,348	+		PGA1_c19710	0.79	-0.9
2,047,356	-		PGA1_c19710	0.80	-0.3
2,047,368	-		PGA1_c19710	0.81	-0.5
2,047,384	+		PGA1_c19710	0.82	+0.2
2,047,415	-		PGA1_c19710	0.84	-0.6
2,047,424	+		PGA1_c19710	0.85	-1.6
2,047,438	+		PGA1_c19710	0.86	-0.3
2,047,465	+		PGA1_c19710	0.88	-0.3
2,047,479	-		PGA1_c19710	0.89	-0.9
2,047,517	+				+0.1
2,047,564	+				-0.4
2,047,569	+				+0.6
2,047,569	+				+0.2
2,047,577	-				-0.4
2,047,579	+				-2.1
2,047,632	-				+2.5
2,047,638	-				+0.5
2,047,652	-				-1.4
2,047,652	-				+0.6
2,047,658	+				-1.5
2,047,658	+				+0.3
2,047,658	+				+0.5
2,047,658	+				+1.3
2,047,666	-				+1.6
2,047,666	-				+0.4
2,047,672	-				+0.9
2,047,676	-				+0.2
2,047,677	-				+1.3
2,047,719	+				-0.3
2,047,727	-				+1.8
2,047,727	-				+2.3
2,047,753	+				+1.3
2,047,759	+				+1.4
2,047,761	-				+0.3
2,047,769	+				+0.5
2,047,769	+				-0.4
2,047,769	+				-0.4
2,047,771	-				-2.1
2,047,777	-				+0.0
2,047,777	-				-1.1
2,047,777	-				+0.1
2,047,833	+				-0.2
2,047,900	-				-1.9
2,047,917	-		PGA1_c19720	0.15	+0.9
2,047,932	-		PGA1_c19720	0.19	-0.9
2,047,932	-		PGA1_c19720	0.19	+0.2
2,047,932	-		PGA1_c19720	0.19	+0.5
2,047,932	-		PGA1_c19720	0.19	+1.0
2,047,932	-		PGA1_c19720	0.19	-0.1
2,047,932	-		PGA1_c19720	0.19	+0.4
2,047,932	-		PGA1_c19720	0.19	+1.0
2,047,932	-		PGA1_c19720	0.19	-0.3
2,047,943	-		PGA1_c19720	0.22	+2.5
2,047,969	+		PGA1_c19720	0.30	-0.3
2,047,980	+		PGA1_c19720	0.34	-1.2
2,047,980	+		PGA1_c19720	0.34	-0.6
2,047,980	+		PGA1_c19720	0.34	+0.1
2,047,984	+		PGA1_c19720	0.35	+0.9
2,047,984	+		PGA1_c19720	0.35	+1.3
2,047,988	-		PGA1_c19720	0.36	-0.6
2,047,988	-		PGA1_c19720	0.36	-1.1
2,048,002	-		PGA1_c19720	0.40	+0.5
2,048,047	-		PGA1_c19720	0.54	-1.4
2,048,149	-		PGA1_c19720	0.85	-1.1
2,048,164	+		PGA1_c19720	0.89	+1.1
2,048,174	+				+0.9
2,048,182	-				-0.5
2,048,208	-				-0.3
2,048,211	+				-0.2
2,048,250	+				-1.9
2,048,252	+				-0.3
2,048,262	+				+0.4
2,048,265	+				-1.9
2,048,331	+		PGA1_c19730	0.37	+1.7
2,048,331	+				+0.9
2,048,336	+		PGA1_c19730	0.40	-0.6
2,048,363	+		PGA1_c19730	0.56	-0.6
2,048,385	-		PGA1_c19730	0.68	+1.9
2,048,403	+		PGA1_c19730	0.79	-2.2
2,048,403	+		PGA1_c19730	0.79	+0.9
2,048,440	+				+0.3
2,048,491	+		PGA1_c19740	0.11	+1.9
2,048,492	+		PGA1_c19740	0.12	+0.2
2,048,690	+		PGA1_c19740	0.49	+1.2
2,048,693	-		PGA1_c19740	0.50	-0.1
2,048,732	+		PGA1_c19740	0.57	-1.0
2,048,740	-		PGA1_c19740	0.59	+3.3
2,048,824	-		PGA1_c19740	0.75	-0.2
2,048,870	+		PGA1_c19740	0.84	+0.2