Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18620

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
1,934,738	+		PGA1_c18600	0.69	+2.2
1,934,746	-		PGA1_c18600	0.69	+1.4
1,934,746	-		PGA1_c18600	0.69	+1.9
1,934,746	-		PGA1_c18600	0.69	-1.7
1,934,750	+		PGA1_c18600	0.70	-0.7
1,934,752	+		PGA1_c18600	0.70	-0.9
1,934,758	-		PGA1_c18600	0.71	+0.0
1,934,758	-		PGA1_c18600	0.71	+2.4
1,934,906	-		PGA1_c18600	0.87	+0.4
1,934,910	+		PGA1_c18600	0.88	+2.7
1,934,912	+		PGA1_c18600	0.88	-0.1
1,934,912	+		PGA1_c18600	0.88	+2.3
1,934,912	+		PGA1_c18600	0.88	+1.7
1,934,912	+		PGA1_c18600	0.88	-0.0
1,934,920	-		PGA1_c18600	0.89	+1.1
1,934,920	-		PGA1_c18600	0.89	-0.1
1,934,920	-		PGA1_c18600	0.89	+0.1
1,934,922	+		PGA1_c18600	0.89	+0.8
1,934,922	+		PGA1_c18600	0.89	+0.9
1,934,922	+		PGA1_c18600	0.89	+0.9
1,934,922	+		PGA1_c18600	0.89	-0.5
1,934,922	+		PGA1_c18600	0.89	-0.3
1,934,922	+		PGA1_c18600	0.89	+0.7
1,934,922	+		PGA1_c18600	0.89	-0.2
1,934,922	+		PGA1_c18600	0.89	+0.2
1,934,922	+		PGA1_c18600	0.89	+1.6
1,934,922	+		PGA1_c18600	0.89	+2.6
1,934,922	+		PGA1_c18600	0.89	+1.2
1,934,922	+		PGA1_c18600	0.89	+2.1
1,934,930	-		PGA1_c18600	0.90	+0.6
1,934,930	-		PGA1_c18600	0.90	-0.9
1,934,930	-		PGA1_c18600	0.90	+0.9
1,934,930	-		PGA1_c18600	0.90	+1.7
1,934,930	-		PGA1_c18600	0.90	-2.2
1,934,930	-		PGA1_c18600	0.90	-2.5
1,934,930	-		PGA1_c18600	0.90	-0.5
1,934,930	-		PGA1_c18600	0.90	-0.8
1,934,930	-		PGA1_c18600	0.90	-0.3
1,934,938	-				-1.4
1,934,938	-				+0.3
1,934,938	-				-0.9
1,934,969	+				+0.9
1,934,977	-				+0.0
1,934,997	-				+0.9
1,935,015	+				+0.3
1,935,044	+				+0.4
1,935,044	+				-1.9
1,935,052	-				+0.3
1,935,052	-				-0.1
1,935,054	-				+1.5
1,935,061	+				+0.9
1,935,069	-				+0.9
1,935,189	+				+2.1
1,935,204	-		PGA1_c18610	0.10	-0.1
1,935,218	-		PGA1_c18610	0.13	-1.0
1,935,260	+		PGA1_c18610	0.21	+0.0
1,935,260	+		PGA1_c18610	0.21	-0.6
1,935,311	-		PGA1_c18610	0.31	-0.0
1,935,313	-		PGA1_c18610	0.32	-0.2
1,935,366	-		PGA1_c18610	0.42	+4.1
1,935,366	-		PGA1_c18610	0.42	-2.1
1,935,366	-		PGA1_c18610	0.42	-2.3
1,935,402	-		PGA1_c18610	0.49	-1.2
1,935,481	+		PGA1_c18610	0.65	-0.1
1,935,519	+		PGA1_c18610	0.72	+0.2
1,935,519	+		PGA1_c18610	0.72	+0.4
1,935,532	+		PGA1_c18610	0.75	-0.7
1,935,542	+		PGA1_c18610	0.77	+0.6
1,935,544	+		PGA1_c18610	0.77	+1.2
1,935,546	+		PGA1_c18610	0.78	+2.1
1,935,565	+		PGA1_c18610	0.81	-0.1
1,935,566	+		PGA1_c18610	0.81	-0.7
1,935,566	+		PGA1_c18610	0.81	-0.5
1,935,600	-		PGA1_c18610	0.88	+0.6
1,935,619	-				-2.7
1,935,683	-				+0.2
1,935,687	+				+0.5
1,935,709	+				-3.0
1,935,709	+				+0.1
1,935,717	-		PGA1_c18620	0.10	+3.2
1,935,717	-		PGA1_c18620	0.10	+1.4
1,935,717	-		PGA1_c18620	0.10	+0.9
1,935,717	-		PGA1_c18620	0.10	+0.3
1,935,717	-		PGA1_c18620	0.10	+0.9
1,935,728	+		PGA1_c18620	0.15	+0.9
1,935,743	-		PGA1_c18620	0.21	-1.5
1,935,753	-		PGA1_c18620	0.25	+1.0
1,935,778	-		PGA1_c18620	0.35	-2.6
1,935,778	-		PGA1_c18620	0.35	-0.2
1,935,802	+		PGA1_c18620	0.45	+1.2
1,935,802	+		PGA1_c18620	0.45	-1.7
1,935,810	-		PGA1_c18620	0.49	+1.9
1,935,817	-		PGA1_c18620	0.51	+0.9
1,935,962	-				+0.2
1,936,002	+				+0.8
1,936,006	+				+0.9
1,936,042	+				-0.1
1,936,109	+				-0.5
1,936,109	+				+0.9
1,936,109	+				+1.2
1,936,109	+				+2.4
1,936,117	-				+0.3
1,936,117	-				-0.1
1,936,117	-				-0.5
1,936,117	-				+0.9
1,936,117	-				+0.5
1,936,127	-				+0.7
1,936,152	-				-1.1
1,936,168	-				-0.7
1,936,174	-				+0.7
1,936,237	+				+0.5
1,936,238	+				+0.4
1,936,297	+				-1.0
1,936,369	-				+0.5
1,936,410	-				+0.3
1,936,415	-				-0.7
1,936,420	+				-1.1
1,936,428	-				+3.7
1,936,449	+		PGA1_c18630	0.16	-0.1
1,936,449	+		PGA1_c18630	0.16	+0.3
1,936,474	-		PGA1_c18630	0.26	-2.1
1,936,476	+		PGA1_c18630	0.27	-1.3
1,936,558	-		PGA1_c18630	0.63	+0.9
1,936,580	+		PGA1_c18630	0.72	-0.7
1,936,659	+				-0.9
1,936,699	+				-0.9
1,936,742	+		PGA1_c18640	0.23	+1.0
1,936,743	+		PGA1_c18640	0.23	+0.0
1,936,743	+		PGA1_c18640	0.23	-1.8
1,936,802	-		PGA1_c18640	0.49	-0.5
1,936,844	+		PGA1_c18640	0.68	+0.7
1,936,844	+		PGA1_c18640	0.68	-0.8
1,936,846	-		PGA1_c18640	0.69	+0.2
1,936,852	-		PGA1_c18640	0.72	-0.8