Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17380

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
1,816,703	+		PGA1_c17370	0.70	-1.5
1,816,704	-		PGA1_c17370	0.70	-4.0
1,816,716	+		PGA1_c17370	0.70	-3.2
1,816,746	+		PGA1_c17370	0.71	-1.9
1,816,749	-		PGA1_c17370	0.71	-3.0
1,816,749	-		PGA1_c17370	0.71	-1.1
1,816,849	-		PGA1_c17370	0.75	-1.3
1,816,850	-		PGA1_c17370	0.75	-2.7
1,817,049	+		PGA1_c17370	0.82	-0.1
1,817,146	+		PGA1_c17370	0.85	-0.1
1,817,154	-		PGA1_c17370	0.85	-2.3
1,817,169	+		PGA1_c17370	0.86	-1.6
1,817,169	+		PGA1_c17370	0.86	-1.1
1,817,177	-		PGA1_c17370	0.86	-1.2
1,817,177	-		PGA1_c17370	0.86	-1.9
1,817,230	-		PGA1_c17370	0.88	-2.2
1,817,256	-		PGA1_c17370	0.89	-3.0
1,817,285	-		PGA1_c17370	0.90	-1.6
1,817,416	-				-1.1
1,817,423	+				-1.6
1,817,423	-				-1.2
1,817,431	-				-0.1
1,817,465	-				-1.6
1,817,576	-				-1.9
1,817,588	-				-1.3
1,817,597	-				+0.5
1,817,638	+				-1.4
1,817,646	-				-0.9
1,817,799	-				+1.3
1,817,810	-				-0.1
1,817,813	+				+0.1
1,817,927	-		PGA1_c17380	0.19	+0.1
1,817,951	-		PGA1_c17380	0.20	+0.6
1,817,951	-		PGA1_c17380	0.20	-0.9
1,817,984	+		PGA1_c17380	0.23	+0.7
1,818,124	+		PGA1_c17380	0.34	+0.9
1,818,132	-		PGA1_c17380	0.35	+0.0
1,818,148	+		PGA1_c17380	0.36	+1.6
1,818,148	+		PGA1_c17380	0.36	-0.0
1,818,202	-		PGA1_c17380	0.41	-1.1
1,818,236	+		PGA1_c17380	0.43	-0.3
1,818,304	+		PGA1_c17380	0.49	-0.1
1,818,347	+		PGA1_c17380	0.52	+1.2
1,818,355	-		PGA1_c17380	0.53	+1.6
1,818,392	-		PGA1_c17380	0.56	+0.5
1,818,416	+		PGA1_c17380	0.58	-1.3
1,818,434	-		PGA1_c17380	0.59	-0.7
1,818,486	+		PGA1_c17380	0.63	+1.3
1,818,486	+		PGA1_c17380	0.63	+1.1
1,818,529	+		PGA1_c17380	0.67	-0.3
1,818,583	-		PGA1_c17380	0.71	-0.8
1,818,583	-		PGA1_c17380	0.71	+0.5
1,818,637	-		PGA1_c17380	0.75	+1.3
1,818,697	+		PGA1_c17380	0.80	+0.9
1,818,705	-		PGA1_c17380	0.81	-0.9
1,818,728	-		PGA1_c17380	0.83	+1.5
1,818,740	-		PGA1_c17380	0.84	-2.3
1,818,768	+		PGA1_c17380	0.86	-1.1
1,818,861	+				-1.9
1,818,946	+				+2.1
1,818,954	-				-0.7
1,818,954	-				-1.1
1,818,954	-				+2.3
1,818,969	+				+1.6
1,818,969	+				+2.0
1,818,977	-				-0.1
1,818,995	-				+0.0
1,819,050	-				-0.1
1,819,063	+				-0.9