Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16830

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
1,754,884	+				+1.3
1,754,884	+				+0.3
1,754,884	+				+0.4
1,754,905	-				-1.1
1,755,002	-				-2.3
1,755,026	-		PGA1_c16820	0.11	-1.8
1,755,072	+		PGA1_c16820	0.19	-0.7
1,755,215	+		PGA1_c16820	0.42	+1.3
1,755,233	-		PGA1_c16820	0.45	+0.6
1,755,322	+		PGA1_c16820	0.59	+1.3
1,755,335	-		PGA1_c16820	0.61	-1.5
1,755,336	-		PGA1_c16820	0.62	+0.3
1,755,374	+		PGA1_c16820	0.68	+0.4
1,755,380	+		PGA1_c16820	0.69	-0.1
1,755,392	-		PGA1_c16820	0.71	-0.1
1,755,397	-		PGA1_c16820	0.72	+0.5
1,755,447	+		PGA1_c16820	0.80	+0.5
1,755,449	+		PGA1_c16820	0.80	-0.1
1,755,593	+				-0.7
1,755,601	-				+0.4
1,755,751	+		PGA1_c16830	0.26	+0.4
1,755,767	+		PGA1_c16830	0.29	-1.6
1,755,850	+		PGA1_c16830	0.45	-1.5
1,755,851	+		PGA1_c16830	0.45	-0.7
1,755,878	-		PGA1_c16830	0.51	+0.9
1,755,950	+		PGA1_c16830	0.65	-0.1
1,755,950	+		PGA1_c16830	0.65	+0.0
1,755,958	-		PGA1_c16830	0.67	-1.7
1,755,996	+		PGA1_c16830	0.74	+0.3
1,756,004	-		PGA1_c16830	0.76	-1.0
1,756,142	-				-0.1
1,756,226	-				-0.3
1,756,234	+				+0.6
1,756,234	+				-2.3
1,756,234	+				-0.7
1,756,236	+				+1.7
1,756,242	-				+1.3
1,756,242	-				+0.4
1,756,242	-				-0.1
1,756,247	+				-0.5
1,756,275	+				-0.3
1,756,278	-				+1.1
1,756,317	+				-0.6
1,756,317	+				-2.7
1,756,317	+				+2.2
1,756,325	-				+0.6
1,756,370	-				-0.4
1,756,371	+				-1.0
1,756,430	+				-2.5
1,756,473	-		PGA1_c16840	0.12	-1.0
1,756,639	-		PGA1_c16840	0.26	-0.1
1,756,757	+		PGA1_c16840	0.36	-0.1
1,756,770	-		PGA1_c16840	0.37	-0.4
1,756,785	-		PGA1_c16840	0.38	+1.0
1,756,820	-		PGA1_c16840	0.41	+1.2
1,756,827	-		PGA1_c16840	0.42	+0.4
1,756,855	-		PGA1_c16840	0.44	-1.5
1,756,893	+		PGA1_c16840	0.47	+0.6
1,756,901	-		PGA1_c16840	0.48	-0.5
1,756,901	-		PGA1_c16840	0.48	+1.0
1,756,901	-		PGA1_c16840	0.48	+1.3
1,756,908	+		PGA1_c16840	0.48	-0.1
1,756,909	+		PGA1_c16840	0.49	+0.1
1,756,921	-		PGA1_c16840	0.50	+1.4
1,757,024	-		PGA1_c16840	0.58	-0.9
1,757,104	-		PGA1_c16840	0.65	-1.0
1,757,104	-		PGA1_c16840	0.65	+2.0