Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14360

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
1,490,086	+				+1.0
1,490,087	-				+0.6
1,490,091	+				-0.6
1,490,092	+				+0.7
1,490,094	-				+1.4
1,490,094	-				+0.6
1,490,094	-				-1.6
1,490,101	+				-0.6
1,490,109	-				+1.6
1,490,111	-				-1.3
1,490,160	-				+0.6
1,490,191	+				+0.2
1,490,191	+				-1.6
1,490,199	+		PGA1_c14350	0.11	+0.1
1,490,199	+		PGA1_c14350	0.11	+1.5
1,490,206	-		PGA1_c14350	0.14	-0.0
1,490,207	-		PGA1_c14350	0.14	-1.3
1,490,207	-		PGA1_c14350	0.14	+1.0
1,490,207	-		PGA1_c14350	0.14	-0.4
1,490,207	-		PGA1_c14350	0.14	-1.8
1,490,222	+		PGA1_c14350	0.19	+1.0
1,490,260	+		PGA1_c14350	0.33	-0.3
1,490,260	+		PGA1_c14350	0.33	+0.6
1,490,268	-		PGA1_c14350	0.36	-1.3
1,490,273	-		PGA1_c14350	0.38	+0.5
1,490,285	+		PGA1_c14350	0.42	-2.2
1,490,298	+		PGA1_c14350	0.47	+0.4
1,490,303	+		PGA1_c14350	0.48	-1.3
1,490,308	-		PGA1_c14350	0.50	-2.5
1,490,310	-		PGA1_c14350	0.51	-0.3
1,490,318	+		PGA1_c14350	0.54	+0.4
1,490,323	+		PGA1_c14350	0.56	+1.0
1,490,323	+		PGA1_c14350	0.56	+1.0
1,490,323	+		PGA1_c14350	0.56	-0.0
1,490,330	+		PGA1_c14350	0.58	+1.0
1,490,331	-		PGA1_c14350	0.58	-1.0
1,490,331	-		PGA1_c14350	0.58	+1.0
1,490,331	-		PGA1_c14350	0.58	+0.7
1,490,340	+		PGA1_c14350	0.62	+2.6
1,490,340	+		PGA1_c14350	0.62	-1.5
1,490,340	+		PGA1_c14350	0.62	+1.0
1,490,340	+		PGA1_c14350	0.62	-0.0
1,490,340	+		PGA1_c14350	0.62	+1.0
1,490,340	+		PGA1_c14350	0.62	-1.6
1,490,340	+		PGA1_c14350	0.62	-0.0
1,490,340	+		PGA1_c14350	0.62	-1.6
1,490,340	+		PGA1_c14350	0.62	+1.0
1,490,340	+		PGA1_c14350	0.62	+2.0
1,490,340	+		PGA1_c14350	0.62	-0.0
1,490,340	+		PGA1_c14350	0.62	-0.0
1,490,340	+		PGA1_c14350	0.62	+1.0
1,490,340	+		PGA1_c14350	0.62	-1.0
1,490,340	+		PGA1_c14350	0.62	+0.7
1,490,345	+		PGA1_c14350	0.63	-0.5
1,490,345	+		PGA1_c14350	0.63	-0.0
1,490,348	-		PGA1_c14350	0.65	+0.2
1,490,348	-		PGA1_c14350	0.65	+1.0
1,490,348	-		PGA1_c14350	0.65	+0.5
1,490,348	-		PGA1_c14350	0.65	+0.7
1,490,348	-		PGA1_c14350	0.65	-1.7
1,490,348	-		PGA1_c14350	0.65	+1.3
1,490,348	-		PGA1_c14350	0.65	+1.0
1,490,348	-		PGA1_c14350	0.65	+0.6
1,490,348	-		PGA1_c14350	0.65	+0.7
1,490,368	-		PGA1_c14350	0.72	-1.2
1,490,374	+		PGA1_c14350	0.74	-1.3
1,490,374	+		PGA1_c14350	0.74	+1.0
1,490,374	+		PGA1_c14350	0.74	+1.0
1,490,396	+		PGA1_c14350	0.82	-0.2
1,490,396	+		PGA1_c14350	0.82	+2.0
1,490,399	-		PGA1_c14350	0.83	+0.6
1,490,406	+		PGA1_c14350	0.85	+2.0
1,490,406	+		PGA1_c14350	0.85	+1.0
1,490,414	-		PGA1_c14350	0.88	-1.8
1,490,414	-		PGA1_c14350	0.88	-0.7
1,490,415	-		PGA1_c14350	0.89	-0.3
1,490,464	+				-1.0
1,490,464	+				+1.0
1,490,464	+				+0.4
1,490,464	+				+1.0
1,490,464	+				+1.8
1,490,464	+				+1.3
1,490,464	+				-0.0
1,490,464	+				+1.0
1,490,464	+				-1.0
1,490,464	+				+0.8
1,490,464	+				+0.4
1,490,464	+				+1.0
1,490,464	+				+1.0
1,490,464	+				+0.3
1,490,464	+				-0.1
1,490,464	+				-0.0
1,490,464	+				+1.0
1,490,464	+				-0.0
1,490,464	+				-0.0
1,490,464	+				+1.7
1,490,464	+				-0.6
1,490,464	+				-0.2
1,490,464	+				+1.4
1,490,464	+				-1.0
1,490,464	+				-1.0
1,490,464	+				+2.6
1,490,464	+				+0.3
1,490,464	+				-0.5
1,490,464	+				+1.1
1,490,464	+				-0.0
1,490,464	+				+2.0
1,490,464	+				+1.0
1,490,464	+				-0.8
1,490,464	+				-1.0
1,490,464	+				-1.3
1,490,464	+				+2.8
1,490,464	+				+2.0
1,490,464	+				-0.0
1,490,464	+				+2.3
1,490,464	+				-0.0
1,490,464	+				-1.2
1,490,464	+				-1.3
1,490,464	+				-1.3
1,490,464	+				+1.0
1,490,464	+				-0.0
1,490,464	+				-0.1
1,490,464	+				+0.2
1,490,464	+				+0.3
1,490,464	+				+1.4
1,490,464	+				-0.3
1,490,464	+				-1.0
1,490,464	+				+2.0
1,490,464	+				+0.3
1,490,464	+				-0.0
1,490,464	+				-2.0
1,490,464	+				-0.6
1,490,464	+				-1.3
1,490,464	+				+1.2
1,490,464	+				+1.0
1,490,464	+				+0.4
1,490,464	+				-1.0
1,490,464	+				+1.5
1,490,464	+				-0.0
1,490,464	+				+1.8
1,490,464	+				+1.0
1,490,464	+				-1.6
1,490,464	+				+0.7
1,490,464	+				-1.3
1,490,464	+				+2.4
1,490,464	+				+0.4
1,490,464	+				-1.3
1,490,464	+				+1.0
1,490,464	+				+0.4
1,490,464	+				+0.3
1,490,464	+				+1.0
1,490,464	+				+2.0
1,490,464	+				+2.6
1,490,464	+				+0.4
1,490,464	+				+0.1
1,490,464	+				-0.0
1,490,464	+				+0.4
1,490,464	+				-0.0
1,490,464	+				-1.8
1,490,464	+				+0.1
1,490,464	+				+0.8
1,490,464	+				-1.8
1,490,464	+				-0.0
1,490,464	+				-0.6
1,490,466	+				+2.6
1,490,466	+				+0.4
1,490,472	-				-0.0
1,490,472	-				-1.0
1,490,472	-				-2.0
1,490,472	-				-0.8
1,490,472	-				-0.7
1,490,472	-				-0.2
1,490,472	-				+2.0
1,490,472	-				-0.3
1,490,472	-				+1.4
1,490,472	-				+1.0
1,490,472	-				+0.5
1,490,472	-				+1.0
1,490,472	-				+0.5
1,490,472	-				+0.2
1,490,472	-				+0.4
1,490,472	-				+0.6
1,490,472	-				-1.0
1,490,472	-				+0.5
1,490,472	-				-0.6
1,490,472	-				-1.8
1,490,472	-				-0.0
1,490,472	-				-1.7
1,490,472	-				-1.3
1,490,472	-				+3.1
1,490,472	-				+1.8
1,490,472	-				+2.3
1,490,472	-				-0.6
1,490,472	-				-1.0
1,490,472	-				+1.0
1,490,472	-				-0.0
1,490,472	-				-0.1
1,490,472	-				-1.3
1,490,472	-				+0.7
1,490,472	-				-0.6
1,490,472	-				-0.2
1,490,472	-				-0.2
1,490,472	-				-0.3
1,490,472	-				+1.6
1,490,472	-				-1.8
1,490,472	-				+2.0
1,490,472	-				+0.3
1,490,472	-				-0.2
1,490,472	-				-0.2
1,490,472	-				-1.6
1,490,472	-				-0.6
1,490,472	-				+0.4
1,490,472	-				+0.8
1,490,472	-				+1.0
1,490,472	-				+1.0
1,490,472	-				-0.0
1,490,472	-				+0.6
1,490,472	-				+0.2
1,490,472	-				-1.4
1,490,472	-				+0.4
1,490,472	-				-0.6
1,490,472	-				-2.3
1,490,472	-				-1.0
1,490,472	-				+0.4
1,490,472	-				+1.0
1,490,472	-				+1.0
1,490,472	-				+0.3
1,490,472	-				-2.6
1,490,472	-				-0.6
1,490,472	-				+3.3
1,490,472	-				-0.0
1,490,472	-				+1.7
1,490,472	-				+3.8
1,490,472	-				+0.6
1,490,472	-				-1.3
1,490,472	-				+1.0
1,490,474	-				+1.0
1,490,526	+				+3.3
1,490,526	+				+1.0
1,490,540	+				-0.6
1,490,542	+				-0.6
1,490,542	+				-0.6
1,490,548	-				-1.7
1,490,550	+				+2.2
1,490,550	+				+1.0
1,490,550	+				+1.0
1,490,550	+				+0.4
1,490,550	+				-0.6
1,490,550	+				-0.9
1,490,550	+				-1.0
1,490,550	+				+1.0
1,490,550	+				-0.8
1,490,550	+				+1.0
1,490,550	+				+1.0
1,490,550	-				+0.3
1,490,555	-				+0.1
1,490,558	-				-1.6
1,490,558	-				-1.2
1,490,558	-				-1.6
1,490,558	-				-0.5
1,490,558	-				-1.3
1,490,558	-				+0.4
1,490,558	-				-1.3
1,490,558	-				-2.0
1,490,558	-				+0.4
1,490,592	+				-0.9
1,490,608	+				+2.0
1,490,613	-				+0.7
1,490,615	+				+0.7
1,490,615	+				+2.0
1,490,623	-				-1.3
1,490,623	-				-0.0
1,490,623	-				-0.5
1,490,623	-				+1.0
1,490,628	-				-1.2
1,490,629	-				+1.0
1,490,629	-				+0.2
1,490,643	+				+3.3
1,490,643	+				+0.6
1,490,643	+				+2.6
1,490,643	+				-1.7
1,490,643	+				-0.0
1,490,643	+				+0.3
1,490,643	+				+1.0
1,490,643	+				+3.0
1,490,649	-		PGA1_c14360	0.11	+1.3
1,490,651	-		PGA1_c14360	0.11	+1.0
1,490,723	+		PGA1_c14360	0.21	-0.2
1,490,723	+		PGA1_c14360	0.21	-1.3
1,490,730	-		PGA1_c14360	0.22	+0.1
1,490,731	-		PGA1_c14360	0.22	-0.7
1,490,731	-		PGA1_c14360	0.22	-0.0
1,490,731	-		PGA1_c14360	0.22	+1.7
1,490,731	-		PGA1_c14360	0.22	+0.4
1,490,747	+		PGA1_c14360	0.24	-0.0
1,490,755	-		PGA1_c14360	0.25	-1.0
1,490,805	+		PGA1_c14360	0.32	-0.0
1,490,818	-		PGA1_c14360	0.34	-0.4
1,490,868	+		PGA1_c14360	0.41	+0.4
1,490,876	-		PGA1_c14360	0.42	+0.3
1,490,893	+		PGA1_c14360	0.45	+1.0
1,490,913	-		PGA1_c14360	0.47	-0.2
1,490,924	+		PGA1_c14360	0.49	+3.0
1,490,957	-		PGA1_c14360	0.53	-0.6
1,490,967	-		PGA1_c14360	0.55	-0.3
1,490,977	-		PGA1_c14360	0.56	+0.6
1,490,998	-		PGA1_c14360	0.59	-3.3
1,490,998	-		PGA1_c14360	0.59	+0.3
1,491,011	+		PGA1_c14360	0.61	+0.7
1,491,071	-		PGA1_c14360	0.69	-1.0
1,491,153	-		PGA1_c14360	0.81	+2.0
1,491,177	-		PGA1_c14360	0.84	+0.8
1,491,190	+		PGA1_c14360	0.86	-2.7
1,491,284	-				+0.7
1,491,285	+				+2.3
1,491,293	-				-1.3
1,491,294	-				+0.8
1,491,400	+				+1.0
1,491,421	+				+0.6
1,491,422	+				+1.0
1,491,429	+				+0.2