Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12680

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
1,312,820	+		PGA1_c12670	0.44	+0.2
1,312,820	+		PGA1_c12670	0.44	-2.9
1,312,820	+		PGA1_c12670	0.44	+0.8
1,312,828	-		PGA1_c12670	0.44	-0.1
1,312,828	-		PGA1_c12670	0.44	+0.6
1,312,897	-		PGA1_c12670	0.50	+0.0
1,312,954	-		PGA1_c12670	0.54	+0.7
1,312,986	+		PGA1_c12670	0.56	+2.1
1,313,003	-		PGA1_c12670	0.57	-0.5
1,313,069	-		PGA1_c12670	0.62	+0.5
1,313,099	-		PGA1_c12670	0.65	+0.0
1,313,103	-		PGA1_c12670	0.65	+0.1
1,313,103	-		PGA1_c12670	0.65	+0.0
1,313,122	-		PGA1_c12670	0.66	+1.5
1,313,146	-		PGA1_c12670	0.68	-1.7
1,313,297	+		PGA1_c12670	0.79	+1.7
1,313,398	+		PGA1_c12670	0.87	+0.3
1,313,422	-		PGA1_c12670	0.89	+0.4
1,313,537	+				-0.3
1,313,545	-				+2.4
1,313,545	-				-0.1
1,313,545	-				-0.1
1,313,573	-				+0.7
1,313,573	-				+0.0
1,313,616	-				+2.2
1,313,619	-				-0.6
1,313,652	+				+1.0
1,313,763	+				+1.4
1,313,919	-				-2.0
1,313,926	+				+1.1
1,314,010	+		PGA1_c12680	0.15	-0.2
1,314,018	-		PGA1_c12680	0.16	-1.1
1,314,026	+		PGA1_c12680	0.17	-1.2
1,314,034	-		PGA1_c12680	0.17	-1.3
1,314,034	-		PGA1_c12680	0.17	+0.0
1,314,062	-		PGA1_c12680	0.19	+0.1
1,314,147	+		PGA1_c12680	0.26	-0.5
1,314,157	+		PGA1_c12680	0.27	-1.0
1,314,180	-		PGA1_c12680	0.28	-0.4
1,314,196	+		PGA1_c12680	0.30	-0.4
1,314,204	-		PGA1_c12680	0.30	-2.6
1,314,209	+		PGA1_c12680	0.31	-1.8
1,314,239	-		PGA1_c12680	0.33	+0.1
1,314,262	-		PGA1_c12680	0.35	-0.4
1,314,290	+		PGA1_c12680	0.37	+0.4
1,314,346	+		PGA1_c12680	0.41	+0.0
1,314,352	-		PGA1_c12680	0.41	-2.7
1,314,379	+		PGA1_c12680	0.43	+0.2
1,314,387	-		PGA1_c12680	0.44	+0.4
1,314,387	-		PGA1_c12680	0.44	+0.0
1,314,389	+		PGA1_c12680	0.44	+1.5
1,314,397	-		PGA1_c12680	0.45	-0.7
1,314,429	-		PGA1_c12680	0.47	+0.8
1,314,433	-		PGA1_c12680	0.48	-1.7
1,314,433	-		PGA1_c12680	0.48	-1.4
1,314,464	-		PGA1_c12680	0.50	-1.3
1,314,488	+		PGA1_c12680	0.52	+1.0
1,314,515	+		PGA1_c12680	0.54	+1.6
1,314,538	-		PGA1_c12680	0.56	-1.5
1,314,551	+		PGA1_c12680	0.57	-1.5
1,314,663	+		PGA1_c12680	0.65	+0.0
1,314,699	+		PGA1_c12680	0.68	-0.6
1,314,709	+		PGA1_c12680	0.69	-0.1
1,314,709	+		PGA1_c12680	0.69	+0.0
1,314,717	-		PGA1_c12680	0.69	-0.6
1,314,763	+		PGA1_c12680	0.73	+3.0
1,314,821	+		PGA1_c12680	0.77	-1.6
1,314,848	+		PGA1_c12680	0.79	-1.6
1,314,856	-		PGA1_c12680	0.80	-0.1
1,314,856	-		PGA1_c12680	0.80	+0.4
1,314,856	-		PGA1_c12680	0.80	-1.3
1,314,939	-		PGA1_c12680	0.86	-1.8
1,314,941	+		PGA1_c12680	0.86	-1.0
1,314,941	+		PGA1_c12680	0.86	+0.3
1,314,941	+		PGA1_c12680	0.86	-0.7
1,314,949	-		PGA1_c12680	0.87	-1.8
1,314,983	+		PGA1_c12680	0.89	+0.3
1,315,015	-				-0.2
1,315,030	-				-0.3
1,315,078	+				-0.9
1,315,159	+				-1.9
1,315,165	-				+0.1
1,315,198	-				-1.0
1,315,241	+				+0.1
1,315,372	+		PGA1_c12690	0.34	+0.7
1,315,377	+		PGA1_c12690	0.35	-0.5
1,315,474	+		PGA1_c12690	0.57	-1.8
1,315,474	+		PGA1_c12690	0.57	+0.0
1,315,476	+		PGA1_c12690	0.57	-0.7
1,315,482	-		PGA1_c12690	0.59	+0.8
1,315,482	-		PGA1_c12690	0.59	+1.0
1,315,508	+		PGA1_c12690	0.65	-1.9
1,315,561	-		PGA1_c12690	0.77	-0.7
1,315,590	+		PGA1_c12690	0.83	+0.7
1,315,590	+		PGA1_c12690	0.83	-0.6
1,315,598	-		PGA1_c12690	0.85	+1.5
1,315,598	-		PGA1_c12690	0.85	+0.2
1,315,598	-		PGA1_c12690	0.85	-0.2
1,315,609	+		PGA1_c12690	0.87	-2.3
1,315,658	+				+0.7
1,315,789	-		PGA1_c12700	0.38	+0.2
1,315,796	+		PGA1_c12700	0.40	-1.9
1,315,801	+		PGA1_c12700	0.42	+1.0
1,315,815	-		PGA1_c12700	0.46	-0.2
1,315,819	+		PGA1_c12700	0.47	+1.5
1,315,819	+		PGA1_c12700	0.47	+1.6
1,315,827	-		PGA1_c12700	0.49	+0.8
1,315,827	-		PGA1_c12700	0.49	+1.8
1,315,827	-		PGA1_c12700	0.49	+1.5
1,315,880	+		PGA1_c12700	0.65	+0.1
1,315,893	-		PGA1_c12700	0.69	-1.3
1,315,911	+		PGA1_c12700	0.74	-1.0
1,315,999	-				-0.1
1,316,116	+				+0.7
1,316,116	+				-1.2
1,316,116	+				-2.9
1,316,121	+				-0.7