Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12170

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
1,261,839	+		PGA1_c12150	0.59	+0.7
1,261,839	+		PGA1_c12150	0.59	+0.3
1,261,989	-		PGA1_c12150	0.73	-0.5
1,261,989	-		PGA1_c12150	0.73	+1.4
1,262,024	+		PGA1_c12150	0.77	+0.4
1,262,085	+		PGA1_c12150	0.82	-1.6
1,262,114	+		PGA1_c12150	0.85	+0.3
1,262,144	+		PGA1_c12150	0.88	+0.0
1,262,240	-				-1.3
1,262,255	-				-1.0
1,262,264	+				-0.7
1,262,264	+				+1.0
1,262,322	+		PGA1_c12160	0.16	-2.0
1,262,324	-		PGA1_c12160	0.17	-0.2
1,262,330	-		PGA1_c12160	0.19	-1.9
1,262,401	+		PGA1_c12160	0.40	-0.3
1,262,404	-		PGA1_c12160	0.40	-0.1
1,262,409	-		PGA1_c12160	0.42	-1.3
1,262,409	-		PGA1_c12160	0.42	-2.4
1,262,409	-		PGA1_c12160	0.42	+1.4
1,262,409	-		PGA1_c12160	0.42	-1.1
1,262,409	-		PGA1_c12160	0.42	-0.6
1,262,437	+		PGA1_c12160	0.50	+0.3
1,262,437	+		PGA1_c12160	0.50	-0.6
1,262,612	+				+0.0
1,262,612	+				+0.9
1,262,612	+				+0.8
1,262,620	-				+0.2
1,262,620	-				-2.4
1,262,620	-				-1.3
1,262,625	+				+1.4
1,262,668	+				+1.5
1,262,721	+				+0.0
1,262,745	+				-0.9
1,262,797	-				-0.1
1,262,859	+				+0.3
1,262,902	-				-0.6
1,262,922	-		PGA1_c12170	0.10	+1.6
1,262,927	-		PGA1_c12170	0.11	-0.7
1,262,946	+		PGA1_c12170	0.12	-0.3
1,262,993	-		PGA1_c12170	0.15	+1.8
1,263,014	+		PGA1_c12170	0.16	-1.1
1,263,030	+		PGA1_c12170	0.17	-1.3
1,263,030	+		PGA1_c12170	0.17	-1.5
1,263,032	+		PGA1_c12170	0.17	-1.6
1,263,038	-		PGA1_c12170	0.18	+3.6
1,263,200	+		PGA1_c12170	0.28	-0.8
1,263,286	-		PGA1_c12170	0.33	-1.0
1,263,290	+		PGA1_c12170	0.34	+2.0
1,263,290	+		PGA1_c12170	0.34	+0.3
1,263,290	+		PGA1_c12170	0.34	-1.4
1,263,295	+		PGA1_c12170	0.34	-1.2
1,263,298	-		PGA1_c12170	0.34	+1.3
1,263,298	-		PGA1_c12170	0.34	+1.8
1,263,298	-		PGA1_c12170	0.34	+1.5
1,263,303	-		PGA1_c12170	0.35	+2.0
1,263,308	-		PGA1_c12170	0.35	+0.3
1,263,359	-		PGA1_c12170	0.38	-0.6
1,263,373	-		PGA1_c12170	0.39	+1.0
1,263,446	+		PGA1_c12170	0.44	-0.4
1,263,454	-		PGA1_c12170	0.44	-1.1
1,263,477	+		PGA1_c12170	0.46	-0.2
1,263,507	-		PGA1_c12170	0.47	+0.5
1,263,532	-		PGA1_c12170	0.49	+0.6
1,263,551	+		PGA1_c12170	0.50	+2.3
1,263,558	+		PGA1_c12170	0.51	-3.1
1,263,558	+		PGA1_c12170	0.51	+0.4
1,263,566	-		PGA1_c12170	0.51	+0.3
1,263,566	-		PGA1_c12170	0.51	+1.6
1,263,566	-		PGA1_c12170	0.51	+2.2
1,263,566	-		PGA1_c12170	0.51	-0.7
1,263,566	-		PGA1_c12170	0.51	-0.7
1,263,566	-		PGA1_c12170	0.51	+1.6
1,263,576	+		PGA1_c12170	0.52	-0.2
1,263,607	-		PGA1_c12170	0.54	-1.6
1,263,608	+		PGA1_c12170	0.54	+0.8
1,263,653	-		PGA1_c12170	0.57	+1.6
1,263,678	-		PGA1_c12170	0.58	-0.6
1,263,688	-		PGA1_c12170	0.59	-2.3
1,263,848	-		PGA1_c12170	0.69	+0.4
1,263,911	+		PGA1_c12170	0.73	-1.0
1,263,931	+		PGA1_c12170	0.74	+0.5
1,263,952	+		PGA1_c12170	0.76	-0.7
1,264,004	+		PGA1_c12170	0.79	-1.3
1,264,004	+		PGA1_c12170	0.79	-0.9
1,264,012	-		PGA1_c12170	0.79	+0.4
1,264,051	+		PGA1_c12170	0.82	+0.1
1,264,067	-		PGA1_c12170	0.83	+0.6
1,264,087	+		PGA1_c12170	0.84	-0.3
1,264,158	-		PGA1_c12170	0.89	+1.3
1,264,163	-		PGA1_c12170	0.89	+0.4
1,264,178	+				-0.6
1,264,202	+				+1.9
1,264,202	+				+0.4
1,264,247	+				-1.3
1,264,247	+				+0.5
1,264,252	+				+1.3
1,264,252	+				+1.0
1,264,303	+				+0.0
1,264,311	-				+0.3
1,264,324	+				-0.6
1,264,332	-				-0.1
1,264,383	+				-0.6
1,264,391	-				+1.0
1,264,391	-				+0.3
1,264,434	+				+1.2
1,264,449	+				+0.3
1,264,449	+				+0.0
1,264,469	-		PGA1_c12180	0.10	+0.3
1,264,481	+		PGA1_c12180	0.14	-0.1
1,264,575	+		PGA1_c12180	0.45	+0.1
1,264,575	+		PGA1_c12180	0.45	+0.6
1,264,591	-		PGA1_c12180	0.50	+1.9
1,264,651	+		PGA1_c12180	0.69	+1.9
1,264,725	+				-2.9
1,264,812	-				+1.2
1,264,865	+				-0.6
1,264,920	-		PGA1_c12190	0.15	+0.8
1,264,953	+		PGA1_c12190	0.22	-0.1
1,264,957	+		PGA1_c12190	0.22	-1.4
1,264,965	-		PGA1_c12190	0.24	+1.0
1,264,965	-		PGA1_c12190	0.24	+1.2
1,264,980	-		PGA1_c12190	0.27	-1.1
1,265,012	+		PGA1_c12190	0.34	+0.9
1,265,023	-		PGA1_c12190	0.36	+1.0
1,265,118	+		PGA1_c12190	0.55	+1.0
1,265,146	-		PGA1_c12190	0.61	-1.5
1,265,146	-		PGA1_c12190	0.61	+0.6
1,265,146	-		PGA1_c12190	0.61	+1.1
1,265,146	-		PGA1_c12190	0.61	+0.4
1,265,189	+		PGA1_c12190	0.70	-0.6
1,265,235	-		PGA1_c12190	0.79	+0.4
1,265,301	+				-0.3
1,265,309	-				-0.6
1,265,316	+				-1.3