Strain Fitness in Dechlorosoma suillum PS around Dsui_0676

Experiment: Anaerobic growth in rich media with nitrate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0674 and Dsui_0675 are separated by 11 nucleotidesDsui_0675 and Dsui_0676 are separated by 77 nucleotidesDsui_0676 and Dsui_0677 overlap by 4 nucleotidesDsui_0677 and Dsui_0678 are separated by 129 nucleotides Dsui_0674: Dsui_0674 - cell division protein, at 673,639 to 674,295 _0674 Dsui_0675: Dsui_0675 - putative dithiol-disulfide isomerase involved in polyketide biosynthesis, at 674,307 to 674,966 _0675 Dsui_0676: Dsui_0676 - short-chain dehydrogenase of unknown substrate specificity, at 675,044 to 675,817 _0676 Dsui_0677: Dsui_0677 - hypothetical protein, at 675,814 to 676,635 _0677 Dsui_0678: Dsui_0678 - hypothetical protein, at 676,765 to 677,121 _0678 Position (kb) 675 676Strain fitness (log2 ratio) -2 -1 0 1 2at 674.250 kb on + strandat 674.250 kb on + strandat 674.312 kb on - strandat 674.336 kb on - strandat 674.400 kb on + strand, within Dsui_0675at 674.469 kb on - strandat 674.516 kb on - strandat 674.595 kb on + strand, within Dsui_0675at 674.708 kb on + strand, within Dsui_0675at 674.878 kb on - strandat 674.884 kb on - strandat 674.906 kb on + strandat 675.059 kb on - strandat 675.060 kb on - strandat 675.067 kb on - strandat 675.067 kb on - strandat 675.137 kb on - strandat 675.559 kb on - strand, within Dsui_0676at 675.618 kb on + strand, within Dsui_0676at 675.627 kb on - strand, within Dsui_0676at 675.760 kb on + strandat 675.780 kb on + strandat 675.784 kb on + strandat 675.788 kb on - strandat 676.016 kb on + strand, within Dsui_0677at 676.258 kb on + strandat 676.280 kb on + strand, within Dsui_0677at 676.280 kb on - strand, within Dsui_0677at 676.302 kb on - strand, within Dsui_0677at 676.620 kb on + strandat 676.645 kb on - strandat 676.715 kb on + strandat 676.723 kb on - strandat 676.723 kb on - strandat 676.772 kb on + strandat 676.772 kb on + strandat 676.772 kb on + strandat 676.780 kb on - strandat 676.780 kb on - strandat 676.780 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with nitrate electron acceptor
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674,250 + -0.9
674,250 + -0.9
674,312 - +0.3
674,336 - +2.3
674,400 + Dsui_0675 0.14 -2.1
674,469 - +0.3
674,516 - +0.7
674,595 + Dsui_0675 0.44 -1.1
674,708 + Dsui_0675 0.61 -1.7
674,878 - +1.3
674,884 - +0.3
674,906 + -0.7
675,059 - +0.4
675,060 - -0.3
675,067 - -0.3
675,067 - -0.5
675,137 - -0.7
675,559 - Dsui_0676 0.67 -0.9
675,618 + Dsui_0676 0.74 -0.5
675,627 - Dsui_0676 0.75 -0.5
675,760 + -0.4
675,780 + +2.7
675,784 + +0.3
675,788 - +2.7
676,016 + Dsui_0677 0.25 -1.3
676,258 + +0.7
676,280 + Dsui_0677 0.57 +1.0
676,280 - Dsui_0677 0.57 -0.2
676,302 - Dsui_0677 0.59 -1.1
676,620 + -1.1
676,645 - +0.1
676,715 + +0.7
676,723 - +0.0
676,723 - -0.7
676,772 + -1.3
676,772 + -2.2
676,772 + -0.8
676,780 - -0.6
676,780 - -2.3
676,780 - +0.3

Or see this region's nucleotide sequence