Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c10150

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
1,049,351	-		PGA1_c10140	0.43	+0.4
1,049,406	-		PGA1_c10140	0.48	+0.1
1,049,413	+		PGA1_c10140	0.48	+0.2
1,049,413	+		PGA1_c10140	0.48	-1.8
1,049,421	-		PGA1_c10140	0.49	-1.1
1,049,459	+		PGA1_c10140	0.52	-2.2
1,049,467	-		PGA1_c10140	0.53	-0.9
1,049,515	-		PGA1_c10140	0.57	-0.1
1,049,534	-		PGA1_c10140	0.59	-0.1
1,049,546	-		PGA1_c10140	0.60	-1.1
1,049,546	-		PGA1_c10140	0.60	-1.3
1,049,566	+		PGA1_c10140	0.61	-1.1
1,049,571	-		PGA1_c10140	0.62	-0.1
1,049,587	-		PGA1_c10140	0.63	-0.3
1,049,595	+		PGA1_c10140	0.64	+0.0
1,049,595	+		PGA1_c10140	0.64	-0.1
1,049,603	+		PGA1_c10140	0.64	-0.5
1,049,603	-		PGA1_c10140	0.64	-0.0
1,049,623	-		PGA1_c10140	0.66	-0.5
1,049,726	-		PGA1_c10140	0.75	+0.1
1,049,745	-		PGA1_c10140	0.77	+0.2
1,049,786	+		PGA1_c10140	0.80	+0.7
1,049,839	+		PGA1_c10140	0.85	+0.6
1,049,908	-				-0.6
1,049,963	+				+0.0
1,049,963	+				-0.8
1,049,963	+				+0.1
1,049,971	-				-1.1
1,049,971	-				+1.5
1,050,026	-				+1.1
1,050,057	+				-0.1
1,050,057	+				+0.6
1,050,058	+				-0.3
1,050,060	-				+0.6
1,050,065	-				-0.1
1,050,065	-				-2.7
1,050,065	-				+0.0
1,050,132	+				+1.4
1,050,140	-				+0.7
1,050,159	+				+1.9
1,050,166	+				-0.7
1,050,174	-				+0.9
1,050,222	+				+1.6
1,050,230	-				+0.6
1,050,322	-				-0.0
1,050,324	+				-0.4
1,050,331	-				+0.5
1,050,332	-				+0.1
1,050,336	+				-0.1
1,050,336	+				+0.6
1,050,336	+				-0.0
1,050,342	-				-1.2
1,050,342	-				+0.4
1,050,374	+		PGA1_c10150	0.11	-0.7
1,050,398	-		PGA1_c10150	0.13	+0.3
1,050,409	-		PGA1_c10150	0.14	+0.3
1,050,449	+		PGA1_c10150	0.18	-0.2
1,050,457	-		PGA1_c10150	0.18	-1.1
1,050,457	-		PGA1_c10150	0.18	-0.9
1,050,457	-		PGA1_c10150	0.18	+2.1
1,050,478	+		PGA1_c10150	0.20	+1.3
1,050,500	-		PGA1_c10150	0.22	-0.6
1,050,516	+		PGA1_c10150	0.23	+0.1
1,050,524	-		PGA1_c10150	0.24	-1.0
1,050,533	-		PGA1_c10150	0.25	-2.0
1,050,572	+		PGA1_c10150	0.28	-1.7
1,050,713	-		PGA1_c10150	0.40	-1.0
1,050,733	-		PGA1_c10150	0.42	-0.3
1,050,795	-		PGA1_c10150	0.47	-1.9
1,050,931	-		PGA1_c10150	0.59	+0.4
1,050,972	+		PGA1_c10150	0.62	-1.0
1,050,980	-		PGA1_c10150	0.63	+1.3
1,051,019	+		PGA1_c10150	0.66	-0.1
1,051,032	-		PGA1_c10150	0.68	+0.9
1,051,122	+		PGA1_c10150	0.75	-0.1
1,051,130	-		PGA1_c10150	0.76	-1.1
1,051,130	-		PGA1_c10150	0.76	-0.1
1,051,130	-		PGA1_c10150	0.76	+0.0
1,051,217	-		PGA1_c10150	0.83	+0.6
1,051,228	-		PGA1_c10150	0.84	-0.4
1,051,280	+		PGA1_c10150	0.89	+0.3
1,051,369	-				-0.1
1,051,392	+				-1.7
1,051,392	+				-1.5
1,051,559	-		PGA1_c10160	0.12	+0.7
1,051,669	+		PGA1_c10160	0.21	+1.0
1,051,677	-		PGA1_c10160	0.22	-1.1
1,051,677	-		PGA1_c10160	0.22	-0.1
1,051,677	-		PGA1_c10160	0.22	+2.2
1,051,679	-		PGA1_c10160	0.22	+0.6
1,051,729	-		PGA1_c10160	0.26	+0.3
1,051,741	+		PGA1_c10160	0.27	+0.5
1,051,759	+		PGA1_c10160	0.29	-0.4
1,051,776	+		PGA1_c10160	0.30	+0.4
1,051,895	+		PGA1_c10160	0.41	-0.0
1,051,895	+		PGA1_c10160	0.41	-1.0
1,051,898	-		PGA1_c10160	0.41	+0.0
1,051,900	+		PGA1_c10160	0.41	-0.5
1,051,900	+		PGA1_c10160	0.41	+0.0
1,051,925	+		PGA1_c10160	0.43	-0.3
1,051,926	+		PGA1_c10160	0.43	+0.5
1,051,926	+		PGA1_c10160	0.43	+0.0
1,051,934	-		PGA1_c10160	0.44	+0.1
1,051,934	-		PGA1_c10160	0.44	+0.3
1,051,964	+		PGA1_c10160	0.47	-0.8
1,051,964	+		PGA1_c10160	0.47	+0.4
1,051,966	-		PGA1_c10160	0.47	+0.3
1,051,974	+		PGA1_c10160	0.47	-1.1
1,052,003	-		PGA1_c10160	0.50	+1.1
1,052,025	+		PGA1_c10160	0.52	-1.2
1,052,027	+		PGA1_c10160	0.52	+1.7
1,052,123	+		PGA1_c10160	0.60	+2.7
1,052,208	+		PGA1_c10160	0.67	-0.1
1,052,321	-		PGA1_c10160	0.77	-2.1
1,052,353	+		PGA1_c10160	0.80	-1.4
1,052,393	-		PGA1_c10160	0.83	-0.3
1,052,404	+		PGA1_c10160	0.84	+0.3