Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c09860

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
1,017,040	-		PGA1_c09850	0.60	+1.4
1,017,096	-		PGA1_c09850	0.63	-0.2
1,017,096	-		PGA1_c09850	0.63	-1.0
1,017,101	-		PGA1_c09850	0.63	+1.7
1,017,232	+		PGA1_c09850	0.68	-0.6
1,017,232	+		PGA1_c09850	0.68	-2.2
1,017,240	-		PGA1_c09850	0.69	-0.8
1,017,240	-		PGA1_c09850	0.69	-0.2
1,017,240	-		PGA1_c09850	0.69	+0.8
1,017,272	-		PGA1_c09850	0.70	+1.2
1,017,301	+		PGA1_c09850	0.71	-0.8
1,017,386	-		PGA1_c09850	0.75	-2.8
1,017,561	+		PGA1_c09850	0.82	+0.6
1,017,561	+		PGA1_c09850	0.82	-0.9
1,017,621	+		PGA1_c09850	0.85	-0.8
1,017,629	-		PGA1_c09850	0.85	-0.8
1,017,634	-		PGA1_c09850	0.85	-1.5
1,017,638	-		PGA1_c09850	0.86	-0.2
1,017,661	+		PGA1_c09850	0.87	+1.0
1,017,684	-		PGA1_c09850	0.88	+0.1
1,017,709	+		PGA1_c09850	0.89	+0.2
1,017,789	+				-2.6
1,017,797	+				+0.1
1,017,813	+				-0.1
1,017,866	+				+0.6
1,017,866	+				+0.7
1,017,874	-				-2.3
1,017,902	+				-1.5
1,017,905	-				+0.6
1,017,910	-				-1.5
1,017,943	+				+2.2
1,017,948	+				+0.7
1,017,948	+				-0.5
1,017,971	+				+0.8
1,017,972	+				-0.2
1,018,039	-				+0.4
1,018,119	-				-1.8
1,018,209	-		PGA1_c09860	0.13	-0.9
1,018,306	+		PGA1_c09860	0.21	-2.3
1,018,306	+		PGA1_c09860	0.21	-0.2
1,018,306	+		PGA1_c09860	0.21	+0.0
1,018,314	-		PGA1_c09860	0.21	-2.3
1,018,314	-		PGA1_c09860	0.21	+0.3
1,018,316	+		PGA1_c09860	0.21	-0.8
1,018,332	-		PGA1_c09860	0.23	-0.9
1,018,361	-		PGA1_c09860	0.25	-0.2
1,018,386	-		PGA1_c09860	0.27	+1.1
1,018,426	+		PGA1_c09860	0.30	-0.2
1,018,427	+		PGA1_c09860	0.30	-0.6
1,018,427	-		PGA1_c09860	0.30	-0.8
1,018,482	-		PGA1_c09860	0.34	-0.8
1,018,559	+		PGA1_c09860	0.40	+0.5
1,018,656	+		PGA1_c09860	0.47	-0.3
1,018,709	+		PGA1_c09860	0.51	+0.2
1,018,709	+		PGA1_c09860	0.51	-1.8
1,018,736	-		PGA1_c09860	0.53	-3.5
1,018,757	+		PGA1_c09860	0.54	-0.0
1,018,757	+		PGA1_c09860	0.54	+1.1
1,018,762	+		PGA1_c09860	0.55	+0.3
1,018,799	+		PGA1_c09860	0.57	-0.8
1,018,839	+		PGA1_c09860	0.60	-0.8
1,018,847	+		PGA1_c09860	0.61	+0.3
1,018,902	-		PGA1_c09860	0.65	+0.8
1,019,030	-		PGA1_c09860	0.75	-0.4
1,019,030	-		PGA1_c09860	0.75	-1.4
1,019,117	+		PGA1_c09860	0.81	-0.4
1,019,131	-		PGA1_c09860	0.82	-0.8
1,019,134	-		PGA1_c09860	0.82	-1.1
1,019,153	-		PGA1_c09860	0.84	+0.3
1,019,155	-		PGA1_c09860	0.84	-1.5
1,019,229	+		PGA1_c09860	0.89	-1.6
1,019,229	+		PGA1_c09860	0.89	-1.0
1,019,237	+				-2.4
1,019,237	-				-0.2
1,019,237	-				-1.5
1,019,256	+				-0.2
1,019,287	+				-0.5
1,019,370	+				-0.8
1,019,376	-				+1.0
1,019,378	-				+1.8
1,019,391	+				+0.0
1,019,493	-				+1.5
1,019,600	-		PGA1_c09870	0.14	+0.8
1,019,636	-		PGA1_c09870	0.22	+0.1
1,019,696	+		PGA1_c09870	0.35	+0.4
1,019,696	+		PGA1_c09870	0.35	+1.0
1,019,766	-		PGA1_c09870	0.51	+0.4
1,019,766	-		PGA1_c09870	0.51	+1.8
1,019,851	+		PGA1_c09870	0.70	+0.2
1,019,859	-		PGA1_c09870	0.71	+1.8
1,019,871	+		PGA1_c09870	0.74	+0.4
1,019,892	-		PGA1_c09870	0.79	-0.6
1,020,116	-				-1.9
1,020,117	-				-0.2
1,020,191	+				-0.2
1,020,283	-				-1.8
1,020,283	-				-1.1
1,020,342	-				-0.2