Experiment: m.b. methylglyoxal 0.004 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c09810 and PGA1_c09820 are separated by 118 nucleotides PGA1_c09820 and PGA1_c09830 are separated by 74 nucleotides
PGA1_c09810: PGA1_c09810 - DnaJ-class molecular chaperone with C-terminal Zn finger domain, at 1,011,793 to 1,012,416
_c09810
PGA1_c09820: PGA1_c09820 - Stress-induced morphogen (activity unknown), at 1,012,535 to 1,012,789
_c09820
PGA1_c09830: PGA1_c09830 - hypothetical protein, at 1,012,864 to 1,013,583
_c09830
Position (kb)
1012
1013 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1011.579 kb on - strand at 1011.605 kb on - strand at 1011.607 kb on + strand at 1011.622 kb on + strand at 1011.627 kb on + strand at 1011.627 kb on + strand at 1011.630 kb on - strand at 1011.635 kb on - strand at 1011.640 kb on + strand at 1011.640 kb on + strand at 1011.640 kb on + strand at 1011.653 kb on - strand at 1011.737 kb on + strand at 1011.803 kb on - strand at 1012.464 kb on + strand at 1012.480 kb on + strand at 1012.488 kb on - strand at 1012.523 kb on + strand at 1012.531 kb on - strand at 1012.531 kb on - strand at 1012.531 kb on - strand at 1012.531 kb on - strand at 1012.531 kb on - strand at 1012.531 kb on - strand at 1012.559 kb on - strand at 1012.559 kb on - strand at 1012.672 kb on + strand, within PGA1_c09820 at 1012.702 kb on - strand, within PGA1_c09820 at 1012.726 kb on + strand, within PGA1_c09820 at 1012.734 kb on - strand, within PGA1_c09820 at 1012.751 kb on + strand, within PGA1_c09820 at 1012.759 kb on - strand, within PGA1_c09820 at 1012.805 kb on - strand at 1012.862 kb on + strand at 1012.865 kb on - strand at 1012.931 kb on + strand at 1012.953 kb on + strand, within PGA1_c09830 at 1013.051 kb on - strand, within PGA1_c09830 at 1013.147 kb on - strand, within PGA1_c09830 at 1013.154 kb on + strand, within PGA1_c09830 at 1013.162 kb on - strand, within PGA1_c09830 at 1013.185 kb on - strand, within PGA1_c09830 at 1013.235 kb on - strand, within PGA1_c09830 at 1013.267 kb on + strand, within PGA1_c09830 at 1013.296 kb on + strand, within PGA1_c09830 at 1013.299 kb on - strand, within PGA1_c09830 at 1013.304 kb on - strand, within PGA1_c09830 at 1013.329 kb on - strand, within PGA1_c09830 at 1013.329 kb on - strand, within PGA1_c09830 at 1013.368 kb on + strand, within PGA1_c09830 at 1013.445 kb on + strand, within PGA1_c09830 at 1013.462 kb on + strand, within PGA1_c09830 at 1013.470 kb on - strand, within PGA1_c09830 at 1013.516 kb on + strand at 1013.525 kb on + strand at 1013.533 kb on - strand at 1013.533 kb on - strand at 1013.533 kb on - strand at 1013.533 kb on - strand at 1013.533 kb on - strand at 1013.533 kb on - strand at 1013.637 kb on - strand at 1013.637 kb on - strand at 1013.646 kb on + strand at 1013.646 kb on + strand at 1013.653 kb on + strand at 1013.654 kb on - strand at 1013.730 kb on - strand at 1013.732 kb on + strand at 1013.734 kb on + strand at 1013.735 kb on - strand at 1013.740 kb on - strand at 1013.740 kb on - strand at 1013.740 kb on - strand at 1013.740 kb on - strand at 1013.742 kb on - strand at 1013.742 kb on - strand at 1013.769 kb on + strand at 1013.784 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.004 vol% remove 1,011,579 - +1.2 1,011,605 - +0.5 1,011,607 + -2.0 1,011,622 + +1.2 1,011,627 + +0.5 1,011,627 + +0.8 1,011,630 - +0.2 1,011,635 - +1.6 1,011,640 + -1.2 1,011,640 + +1.6 1,011,640 + +1.1 1,011,653 - +0.8 1,011,737 + +0.5 1,011,803 - +0.3 1,012,464 + +0.8 1,012,480 + +1.4 1,012,488 - +0.8 1,012,523 + -0.8 1,012,531 - -0.9 1,012,531 - -0.2 1,012,531 - -0.2 1,012,531 - -0.2 1,012,531 - +0.6 1,012,531 - +0.2 1,012,559 - -0.2 1,012,559 - -0.2 1,012,672 + PGA1_c09820 0.54 +0.8 1,012,702 - PGA1_c09820 0.65 -0.2 1,012,726 + PGA1_c09820 0.75 +0.8 1,012,734 - PGA1_c09820 0.78 +1.8 1,012,751 + PGA1_c09820 0.85 +1.4 1,012,759 - PGA1_c09820 0.88 +1.1 1,012,805 - +0.2 1,012,862 + +2.4 1,012,865 - +1.8 1,012,931 + -1.2 1,012,953 + PGA1_c09830 0.12 +0.8 1,013,051 - PGA1_c09830 0.26 +0.5 1,013,147 - PGA1_c09830 0.39 +0.2 1,013,154 + PGA1_c09830 0.40 -1.8 1,013,162 - PGA1_c09830 0.41 -0.3 1,013,185 - PGA1_c09830 0.45 -0.8 1,013,235 - PGA1_c09830 0.52 +1.7 1,013,267 + PGA1_c09830 0.56 +0.5 1,013,296 + PGA1_c09830 0.60 -1.2 1,013,299 - PGA1_c09830 0.60 +1.4 1,013,304 - PGA1_c09830 0.61 +0.6 1,013,329 - PGA1_c09830 0.65 +0.6 1,013,329 - PGA1_c09830 0.65 -0.4 1,013,368 + PGA1_c09830 0.70 -0.8 1,013,445 + PGA1_c09830 0.81 +0.6 1,013,462 + PGA1_c09830 0.83 -1.7 1,013,470 - PGA1_c09830 0.84 +1.8 1,013,516 + -1.8 1,013,525 + +0.8 1,013,533 - +0.8 1,013,533 - +2.8 1,013,533 - -0.2 1,013,533 - +2.8 1,013,533 - +0.5 1,013,533 - +1.8 1,013,637 - +0.4 1,013,637 - -0.8 1,013,646 + +0.2 1,013,646 + -0.2 1,013,653 + +0.9 1,013,654 - +0.1 1,013,730 - -1.2 1,013,732 + +0.8 1,013,734 + -0.9 1,013,735 - -0.5 1,013,740 - +2.4 1,013,740 - +1.4 1,013,740 - -2.3 1,013,740 - -1.2 1,013,742 - +1.4 1,013,742 - +0.8 1,013,769 + +0.4 1,013,784 - -1.2
Or see this region's nucleotide sequence