Experiment: m.b. methylglyoxal 0.004 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c09650 and PGA1_c09660 are separated by 286 nucleotides PGA1_c09660 and PGA1_c09670 overlap by 13 nucleotides PGA1_c09670 and PGA1_c09680 are separated by 1 nucleotides
PGA1_c09650: PGA1_c09650 - UDP-N-acetylenolpyruvoylglucosamine reductase MurB, at 989,033 to 989,956
_c09650
PGA1_c09660: PGA1_c09660 - D-alanine--D-alanine ligase Ddl, at 990,243 to 991,163
_c09660
PGA1_c09670: PGA1_c09670 - putative cell division protein FtsQ, at 991,151 to 992,044
_c09670
PGA1_c09680: PGA1_c09680 - celldivision protein FtsA, at 992,046 to 993,380
_c09680
Position (kb)
990
991
992 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 989.932 kb on + strand at 989.992 kb on + strand at 990.088 kb on - strand at 990.088 kb on - strand at 990.110 kb on + strand at 990.110 kb on + strand at 990.110 kb on + strand at 990.110 kb on + strand at 990.110 kb on + strand at 990.110 kb on + strand at 990.110 kb on + strand at 990.110 kb on + strand at 990.110 kb on + strand at 990.110 kb on + strand at 990.117 kb on + strand at 990.118 kb on - strand at 990.118 kb on - strand at 990.118 kb on - strand at 990.118 kb on - strand at 990.118 kb on - strand at 990.118 kb on - strand at 990.118 kb on - strand at 990.118 kb on - strand at 990.127 kb on + strand at 990.162 kb on + strand at 992.023 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.004 vol% remove 989,932 + -0.8 989,992 + -1.5 990,088 - +0.5 990,088 - -2.2 990,110 + -0.7 990,110 + -2.5 990,110 + +0.2 990,110 + -0.2 990,110 + -2.5 990,110 + -1.2 990,110 + -1.5 990,110 + -1.8 990,110 + -0.1 990,110 + +0.0 990,117 + +1.0 990,118 - -0.8 990,118 - +0.8 990,118 - -2.0 990,118 - -2.6 990,118 - -1.3 990,118 - -0.8 990,118 - -1.5 990,118 - -2.0 990,127 + +0.1 990,162 + -1.8 992,023 + +1.8
Or see this region's nucleotide sequence