Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35070

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
3,678,570	-		PGA1_c35050	0.44	-0.7
3,678,577	-		PGA1_c35050	0.45	-2.4
3,678,579	+		PGA1_c35050	0.45	+0.9
3,678,606	+		PGA1_c35050	0.47	-0.6
3,678,606	+		PGA1_c35050	0.47	+0.2
3,678,614	-		PGA1_c35050	0.48	+0.0
3,678,615	-		PGA1_c35050	0.48	-0.4
3,678,643	+		PGA1_c35050	0.50	+0.8
3,678,658	-		PGA1_c35050	0.52	+0.0
3,678,676	-		PGA1_c35050	0.53	-0.8
3,678,676	-		PGA1_c35050	0.53	+0.2
3,678,779	+		PGA1_c35050	0.62	+0.6
3,678,787	-		PGA1_c35050	0.63	+0.4
3,678,787	-		PGA1_c35050	0.63	-0.8
3,678,787	-		PGA1_c35050	0.63	+0.9
3,678,795	-		PGA1_c35050	0.64	-1.6
3,678,801	-		PGA1_c35050	0.64	+0.3
3,678,935	+		PGA1_c35050	0.76	-2.1
3,678,972	+		PGA1_c35050	0.79	-1.7
3,678,972	+		PGA1_c35050	0.79	-0.2
3,678,989	-		PGA1_c35050	0.80	-1.0
3,679,103	+				-1.3
3,679,111	-				-0.5
3,679,124	+				-1.8
3,679,127	+				+1.5
3,679,135	-				+0.0
3,679,135	-				+0.1
3,679,184	+				+0.7
3,679,191	+				-0.2
3,679,200	-				-1.0
3,679,230	+				-0.0
3,679,238	-				-1.8
3,679,240	+				-0.1
3,679,269	-		PGA1_c35060	0.13	+0.6
3,679,280	-		PGA1_c35060	0.16	-0.9
3,679,285	+		PGA1_c35060	0.18	-0.4
3,679,297	-		PGA1_c35060	0.21	+1.0
3,679,301	-		PGA1_c35060	0.22	+0.2
3,679,426	-		PGA1_c35060	0.58	+1.0
3,679,508	-		PGA1_c35060	0.81	+0.3
3,679,514	-		PGA1_c35060	0.82	-0.3
3,679,565	-				+0.2
3,680,474	-				+0.5
3,680,483	-				-1.1
3,680,499	-				-0.5
3,680,549	-				-1.3
3,680,549	-				-2.0
3,680,549	-				-1.1
3,680,563	+		PGA1_c35080	0.10	-1.1
3,680,662	-		PGA1_c35080	0.23	-2.3
3,680,752	-		PGA1_c35080	0.34	-2.2
3,680,943	+		PGA1_c35080	0.58	-1.7
3,680,943	+		PGA1_c35080	0.58	-1.1
3,681,087	-		PGA1_c35080	0.76	-1.8
3,681,102	-		PGA1_c35080	0.78	-2.0
3,681,287	-				-1.4
3,681,326	-				+1.3
3,681,418	+		PGA1_c35090	0.22	+1.2
3,681,432	+		PGA1_c35090	0.25	-3.4
3,681,432	+		PGA1_c35090	0.25	+0.3
3,681,440	-		PGA1_c35090	0.26	-0.6
3,681,448	+		PGA1_c35090	0.27	-0.3
3,681,451	-		PGA1_c35090	0.28	+0.7