Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32720

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
3,428,298	+		PGA1_c32700	0.61	+0.3
3,428,314	-		PGA1_c32700	0.62	-0.3
3,428,314	-		PGA1_c32700	0.62	+0.9
3,428,348	+		PGA1_c32700	0.65	+0.7
3,428,354	-		PGA1_c32700	0.66	+0.0
3,428,368	+		PGA1_c32700	0.67	+1.0
3,428,385	+		PGA1_c32700	0.68	+0.5
3,428,410	-		PGA1_c32700	0.71	+0.5
3,428,502	-		PGA1_c32700	0.79	+0.7
3,428,556	-		PGA1_c32700	0.83	-0.3
3,428,573	+		PGA1_c32700	0.85	+2.3
3,428,605	-		PGA1_c32700	0.88	-0.6
3,428,652	+				-0.9
3,428,711	+				-1.1
3,428,711	+				+0.1
3,428,719	+				+0.2
3,428,734	-				+0.8
3,428,758	+				+0.0
3,428,766	-				-0.7
3,428,766	-				+0.9
3,428,777	-				-2.8
3,428,777	-				+0.0
3,428,777	-				+2.3
3,428,811	+				-2.0
3,428,844	-				+1.3
3,428,885	+				-0.3
3,428,893	-				-1.0
3,428,900	+		PGA1_c32710	0.11	+0.5
3,429,037	-		PGA1_c32710	0.53	-1.0
3,429,119	-		PGA1_c32710	0.78	+0.2
3,429,144	+		PGA1_c32710	0.86	+2.1
3,429,152	-		PGA1_c32710	0.89	+0.5
3,429,232	-				-0.3
3,429,250	+				-0.7
3,429,294	-				-0.9
3,429,343	-				-0.4
3,429,381	-				-0.1
3,429,390	+				-0.1
3,429,409	+				+1.0
3,429,438	+		PGA1_c32720	0.12	-0.1
3,429,462	+		PGA1_c32720	0.13	+0.7
3,429,470	-		PGA1_c32720	0.14	-1.8
3,429,492	-		PGA1_c32720	0.16	-2.8
3,429,582	-		PGA1_c32720	0.23	-2.6
3,429,625	+		PGA1_c32720	0.26	+0.6
3,429,625	+		PGA1_c32720	0.26	-0.3
3,429,630	+		PGA1_c32720	0.26	-0.2
3,429,630	+		PGA1_c32720	0.26	-0.1
3,429,633	-		PGA1_c32720	0.26	+1.3
3,429,673	-		PGA1_c32720	0.30	+1.2
3,429,674	+		PGA1_c32720	0.30	-0.7
3,429,747	+		PGA1_c32720	0.35	+0.8
3,429,747	+		PGA1_c32720	0.35	+2.0
3,429,747	-		PGA1_c32720	0.35	+0.4
3,429,755	-		PGA1_c32720	0.36	+0.5
3,429,755	-		PGA1_c32720	0.36	+1.3
3,429,797	+		PGA1_c32720	0.39	+2.6
3,429,805	-		PGA1_c32720	0.40	+0.2
3,429,805	-		PGA1_c32720	0.40	-0.9
3,429,813	+		PGA1_c32720	0.40	+0.7
3,430,014	-		PGA1_c32720	0.56	+0.1
3,430,019	-		PGA1_c32720	0.56	+0.5
3,430,060	-		PGA1_c32720	0.59	-0.7
3,430,060	-		PGA1_c32720	0.59	+1.9
3,430,062	+		PGA1_c32720	0.59	-0.7
3,430,072	-		PGA1_c32720	0.60	+0.3
3,430,089	-		PGA1_c32720	0.62	-0.3
3,430,097	+		PGA1_c32720	0.62	-0.3
3,430,141	+		PGA1_c32720	0.66	+1.1
3,430,149	-		PGA1_c32720	0.66	+0.3
3,430,149	-		PGA1_c32720	0.66	+0.3
3,430,195	+		PGA1_c32720	0.70	+1.5
3,430,195	+		PGA1_c32720	0.70	+0.5
3,430,203	-		PGA1_c32720	0.70	-1.5
3,430,203	-		PGA1_c32720	0.70	-0.9
3,430,203	-		PGA1_c32720	0.70	+0.9
3,430,203	-		PGA1_c32720	0.70	-0.8
3,430,341	-		PGA1_c32720	0.81	+0.1
3,430,466	+				-0.1
3,430,504	-				-0.0
3,430,545	+				+2.6
3,430,557	+				-0.2
3,430,565	-				-2.4
3,430,581	-				+0.2
3,430,617	+				-1.0
3,430,639	+				-1.5
3,430,647	-				+1.5
3,430,704	-				-2.3
3,430,768	+		PGA1_c32730	0.15	-1.3
3,430,847	-		PGA1_c32730	0.21	-0.8
3,430,868	+		PGA1_c32730	0.23	+0.5
3,430,888	+		PGA1_c32730	0.24	-1.8
3,430,897	+		PGA1_c32730	0.25	-1.4
3,430,907	+		PGA1_c32730	0.26	-1.8
3,430,908	-		PGA1_c32730	0.26	-0.7
3,430,923	+		PGA1_c32730	0.27	+1.3
3,430,923	+		PGA1_c32730	0.27	-2.3
3,430,923	+		PGA1_c32730	0.27	-0.3
3,430,923	+		PGA1_c32730	0.27	+0.3
3,430,931	-		PGA1_c32730	0.28	-0.6
3,430,931	-		PGA1_c32730	0.28	-1.8
3,430,983	+		PGA1_c32730	0.32	+0.2
3,430,990	-		PGA1_c32730	0.33	-0.4
3,431,059	-		PGA1_c32730	0.38	-1.7
3,431,085	+		PGA1_c32730	0.40	-1.7
3,431,093	-		PGA1_c32730	0.41	-1.7
3,431,111	-		PGA1_c32730	0.42	-2.1
3,431,187	-		PGA1_c32730	0.49	-3.1
3,431,272	+		PGA1_c32730	0.56	-0.9
3,431,362	-		PGA1_c32730	0.63	-1.3
3,431,444	+		PGA1_c32730	0.70	-0.9
3,431,462	-		PGA1_c32730	0.71	-0.3
3,431,554	-		PGA1_c32730	0.78	-0.7
3,431,561	+		PGA1_c32730	0.79	-1.6