Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32260

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
3,382,239	-		PGA1_c32250	0.35	+0.1
3,382,241	+		PGA1_c32250	0.35	-0.2
3,382,241	+		PGA1_c32250	0.35	+0.2
3,382,274	+		PGA1_c32250	0.37	+0.4
3,382,307	+		PGA1_c32250	0.39	+0.2
3,382,307	+		PGA1_c32250	0.39	+0.1
3,382,312	+		PGA1_c32250	0.40	-0.1
3,382,312	+		PGA1_c32250	0.40	-1.1
3,382,312	+		PGA1_c32250	0.40	-0.3
3,382,315	-		PGA1_c32250	0.40	+0.2
3,382,315	-		PGA1_c32250	0.40	-0.4
3,382,315	-		PGA1_c32250	0.40	+0.3
3,382,315	-		PGA1_c32250	0.40	-0.1
3,382,320	-		PGA1_c32250	0.40	-0.3
3,382,320	-		PGA1_c32250	0.40	+0.9
3,382,320	-		PGA1_c32250	0.40	-2.1
3,382,413	+		PGA1_c32250	0.47	+0.4
3,382,413	+		PGA1_c32250	0.47	-0.7
3,382,413	+		PGA1_c32250	0.47	-1.2
3,382,421	-		PGA1_c32250	0.47	-0.7
3,382,421	-		PGA1_c32250	0.47	-1.3
3,382,421	-		PGA1_c32250	0.47	+0.3
3,382,451	-		PGA1_c32250	0.49	+1.7
3,382,455	+		PGA1_c32250	0.49	-0.7
3,382,476	+		PGA1_c32250	0.51	-0.7
3,382,479	-		PGA1_c32250	0.51	+1.2
3,382,479	-		PGA1_c32250	0.51	+0.2
3,382,484	-		PGA1_c32250	0.51	+0.5
3,382,639	-		PGA1_c32250	0.62	-1.3
3,382,655	+		PGA1_c32250	0.63	-1.2
3,382,663	-		PGA1_c32250	0.63	+1.3
3,382,731	-		PGA1_c32250	0.68	-0.3
3,382,749	-		PGA1_c32250	0.69	+1.3
3,382,780	+		PGA1_c32250	0.71	-0.1
3,382,918	-		PGA1_c32250	0.81	-1.5
3,382,938	+		PGA1_c32250	0.82	+0.0
3,383,043	-		PGA1_c32250	0.89	+0.1
3,383,043	-		PGA1_c32250	0.89	-0.1
3,383,123	-				-1.7
3,383,138	-				-0.7
3,383,170	-				-0.4
3,383,208	+				+0.5
3,383,208	+				-1.0
3,383,273	+				+0.4
3,383,324	+				-0.1
3,383,347	+				-0.4
3,383,355	-				+0.4
3,383,380	+		PGA1_c32260	0.11	-0.8
3,383,399	+		PGA1_c32260	0.12	+0.6
3,383,416	+		PGA1_c32260	0.14	-0.2
3,383,416	+		PGA1_c32260	0.14	+0.3
3,383,417	-		PGA1_c32260	0.14	+0.3
3,383,429	-		PGA1_c32260	0.14	+0.8
3,383,447	+		PGA1_c32260	0.16	-0.3
3,383,448	+		PGA1_c32260	0.16	-2.5
3,383,448	+		PGA1_c32260	0.16	-0.2
3,383,456	-		PGA1_c32260	0.16	-0.1
3,383,485	-		PGA1_c32260	0.18	-2.5
3,383,485	-		PGA1_c32260	0.18	+1.3
3,383,485	-		PGA1_c32260	0.18	+0.4
3,383,486	-		PGA1_c32260	0.18	-0.5
3,383,496	+		PGA1_c32260	0.19	+0.6
3,383,552	+		PGA1_c32260	0.22	-0.3
3,383,563	+		PGA1_c32260	0.23	+0.9
3,383,603	+		PGA1_c32260	0.26	-1.6
3,383,662	-		PGA1_c32260	0.30	+2.3
3,383,668	+		PGA1_c32260	0.30	-0.1
3,383,668	+		PGA1_c32260	0.30	+1.0
3,383,676	-		PGA1_c32260	0.31	+0.3
3,383,699	+		PGA1_c32260	0.32	-2.1
3,383,699	+		PGA1_c32260	0.32	-1.4
3,383,699	+		PGA1_c32260	0.32	-0.6
3,383,699	+		PGA1_c32260	0.32	-0.9
3,383,705	+		PGA1_c32260	0.33	-0.1
3,383,707	-		PGA1_c32260	0.33	+0.4
3,383,707	-		PGA1_c32260	0.33	-1.1
3,383,707	-		PGA1_c32260	0.33	-0.8
3,383,710	+		PGA1_c32260	0.33	+0.7
3,383,717	-		PGA1_c32260	0.33	-0.4
3,383,749	-		PGA1_c32260	0.35	-0.6
3,383,751	+		PGA1_c32260	0.36	-0.1
3,383,770	+		PGA1_c32260	0.37	+0.1
3,383,833	-		PGA1_c32260	0.41	+1.6
3,383,843	-		PGA1_c32260	0.42	+0.4
3,383,898	+		PGA1_c32260	0.45	+0.1
3,383,927	+		PGA1_c32260	0.47	-0.6
3,383,930	-		PGA1_c32260	0.47	+0.1
3,383,947	+		PGA1_c32260	0.48	-0.4
3,384,011	+		PGA1_c32260	0.53	-0.5
3,384,016	+		PGA1_c32260	0.53	-0.5
3,384,019	-		PGA1_c32260	0.53	+0.2
3,384,054	+		PGA1_c32260	0.56	+0.2
3,384,060	-		PGA1_c32260	0.56	-0.4
3,384,064	+		PGA1_c32260	0.56	-0.4
3,384,101	+		PGA1_c32260	0.59	+0.3
3,384,109	-		PGA1_c32260	0.59	-0.4
3,384,143	-		PGA1_c32260	0.61	+2.6
3,384,157	+		PGA1_c32260	0.62	+0.7
3,384,157	+		PGA1_c32260	0.62	-0.2
3,384,157	+		PGA1_c32260	0.62	-0.4
3,384,165	-		PGA1_c32260	0.63	-0.2
3,384,167	+		PGA1_c32260	0.63	-0.3
3,384,167	+		PGA1_c32260	0.63	-1.0
3,384,167	+		PGA1_c32260	0.63	+2.0
3,384,167	+		PGA1_c32260	0.63	+0.8
3,384,167	+		PGA1_c32260	0.63	-0.2
3,384,167	+		PGA1_c32260	0.63	-0.1
3,384,167	+		PGA1_c32260	0.63	-1.3
3,384,167	+		PGA1_c32260	0.63	-0.7
3,384,167	+		PGA1_c32260	0.63	+0.3
3,384,167	+		PGA1_c32260	0.63	-0.5
3,384,167	+		PGA1_c32260	0.63	-1.3
3,384,167	+		PGA1_c32260	0.63	-0.4
3,384,167	+		PGA1_c32260	0.63	+0.5
3,384,167	+		PGA1_c32260	0.63	+0.9
3,384,167	+		PGA1_c32260	0.63	-0.3
3,384,169	+		PGA1_c32260	0.63	-0.6
3,384,169	+		PGA1_c32260	0.63	+0.1
3,384,169	+		PGA1_c32260	0.63	-1.2
3,384,172	-		PGA1_c32260	0.63	+0.1
3,384,175	-		PGA1_c32260	0.64	-1.0
3,384,175	-		PGA1_c32260	0.64	-1.1
3,384,175	-		PGA1_c32260	0.64	+0.3
3,384,175	-		PGA1_c32260	0.64	+1.3
3,384,175	-		PGA1_c32260	0.64	-1.1
3,384,175	-		PGA1_c32260	0.64	+0.3
3,384,175	-		PGA1_c32260	0.64	-0.9
3,384,175	-		PGA1_c32260	0.64	-2.1
3,384,175	-		PGA1_c32260	0.64	-0.8
3,384,175	-		PGA1_c32260	0.64	-1.3
3,384,175	-		PGA1_c32260	0.64	+0.5
3,384,175	-		PGA1_c32260	0.64	+0.9
3,384,175	-		PGA1_c32260	0.64	-0.5
3,384,177	-		PGA1_c32260	0.64	-1.0
3,384,177	-		PGA1_c32260	0.64	-0.5
3,384,177	-		PGA1_c32260	0.64	-0.3
3,384,188	+		PGA1_c32260	0.64	+0.2
3,384,315	+		PGA1_c32260	0.73	-0.6
3,384,345	+		PGA1_c32260	0.75	+0.9
3,384,353	-		PGA1_c32260	0.75	+0.9
3,384,436	+		PGA1_c32260	0.81	-0.1
3,384,444	-		PGA1_c32260	0.81	+0.5
3,384,459	+		PGA1_c32260	0.82	-0.2
3,384,492	+		PGA1_c32260	0.84	-1.9
3,384,500	-		PGA1_c32260	0.85	-0.2
3,384,500	-		PGA1_c32260	0.85	+0.6
3,384,521	+		PGA1_c32260	0.86	+0.7
3,384,521	+		PGA1_c32260	0.86	+1.1
3,384,524	-		PGA1_c32260	0.86	+0.5
3,384,550	+		PGA1_c32260	0.88	-0.2
3,384,557	+		PGA1_c32260	0.89	-0.3
3,384,560	-		PGA1_c32260	0.89	+0.5
3,384,565	-		PGA1_c32260	0.89	+0.7
3,384,582	+				+1.5
3,384,582	+				-3.2
3,384,605	-				-0.7
3,384,663	+				-1.3
3,384,669	-				-0.0
3,384,843	+		PGA1_c32270	0.19	-0.7
3,384,957	-		PGA1_c32270	0.40	+0.5
3,384,959	-		PGA1_c32270	0.40	-1.5
3,384,988	+		PGA1_c32270	0.46	+0.9
3,385,010	-		PGA1_c32270	0.50	+0.2
3,385,012	+		PGA1_c32270	0.50	-0.3
3,385,015	-		PGA1_c32270	0.51	-1.2
3,385,019	-		PGA1_c32270	0.51	+0.3
3,385,020	-		PGA1_c32270	0.52	+2.2
3,385,060	-		PGA1_c32270	0.59	+1.0
3,385,067	+		PGA1_c32270	0.60	-0.5
3,385,111	+		PGA1_c32270	0.69	+0.1
3,385,111	+		PGA1_c32270	0.69	-0.7
3,385,111	+		PGA1_c32270	0.69	+1.3
3,385,119	-		PGA1_c32270	0.70	+0.0
3,385,119	-		PGA1_c32270	0.70	+1.4
3,385,119	-		PGA1_c32270	0.70	-0.2
3,385,119	-		PGA1_c32270	0.70	+0.5
3,385,122	+		PGA1_c32270	0.71	-0.1
3,385,144	+		PGA1_c32270	0.75	+0.3
3,385,144	+		PGA1_c32270	0.75	-2.2
3,385,152	-		PGA1_c32270	0.76	-0.7
3,385,152	-		PGA1_c32270	0.76	-0.5
3,385,152	-		PGA1_c32270	0.76	-0.6
3,385,188	-		PGA1_c32270	0.83	+0.6
3,385,202	+		PGA1_c32270	0.85	-0.8
3,385,236	+				+0.6
3,385,254	+				-1.0
3,385,262	-				-2.8
3,385,332	-				+1.7
3,385,335	+				-3.0
3,385,339	+				+0.8
3,385,388	-				+0.3
3,385,393	+				-2.2
3,385,401	-				+0.2
3,385,429	+				-2.8
3,385,484	+		PGA1_c32280	0.14	+0.5
3,385,524	-		PGA1_c32280	0.19	+0.6
3,385,524	-		PGA1_c32280	0.19	-0.6
3,385,576	-		PGA1_c32280	0.24	-1.5
3,385,594	-		PGA1_c32280	0.26	-0.5
3,385,625	+		PGA1_c32280	0.29	-0.1
3,385,625	+		PGA1_c32280	0.29	-0.5
3,385,666	-		PGA1_c32280	0.34	-1.5
3,385,716	+		PGA1_c32280	0.39	+1.1