Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31640

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
3,303,699	+		PGA1_c31630	0.12	-0.6
3,303,721	+		PGA1_c31630	0.14	+0.4
3,303,723	+		PGA1_c31630	0.14	+0.4
3,303,733	+		PGA1_c31630	0.15	+1.2
3,303,815	+		PGA1_c31630	0.24	+0.1
3,303,825	+		PGA1_c31630	0.25	+0.3
3,303,825	+		PGA1_c31630	0.25	-0.8
3,303,825	+		PGA1_c31630	0.25	-1.3
3,303,833	-		PGA1_c31630	0.25	+1.0
3,303,833	-		PGA1_c31630	0.25	-1.1
3,303,833	-		PGA1_c31630	0.25	+0.2
3,303,833	-		PGA1_c31630	0.25	+0.0
3,303,896	+		PGA1_c31630	0.32	-1.2
3,303,966	-		PGA1_c31630	0.39	+0.0
3,304,035	+		PGA1_c31630	0.46	+0.5
3,304,035	+		PGA1_c31630	0.46	-0.2
3,304,043	-		PGA1_c31630	0.47	-1.6
3,304,102	-		PGA1_c31630	0.53	+2.4
3,304,151	+		PGA1_c31630	0.58	-0.3
3,304,168	+		PGA1_c31630	0.60	+2.5
3,304,263	-		PGA1_c31630	0.70	+1.1
3,304,268	-		PGA1_c31630	0.70	+1.0
3,304,273	-		PGA1_c31630	0.71	-0.4
3,304,301	-		PGA1_c31630	0.74	+0.0
3,304,366	-		PGA1_c31630	0.81	-0.0
3,304,397	+		PGA1_c31630	0.84	-0.9
3,304,445	+		PGA1_c31630	0.89	+0.6
3,304,445	+		PGA1_c31630	0.89	-1.8
3,304,445	+		PGA1_c31630	0.89	+0.7
3,304,452	-		PGA1_c31630	0.90	+0.6
3,304,460	+				+0.5
3,304,465	+				+0.2
3,304,468	-				-0.4
3,304,542	+				+0.2
3,304,547	+				-1.1
3,304,547	+				+0.9
3,304,555	-				-0.6
3,304,606	+				-0.3
3,304,614	-				+0.4
3,304,659	-		PGA1_c31640	0.15	+0.4
3,304,659	-		PGA1_c31640	0.15	-0.1
3,304,679	+		PGA1_c31640	0.18	-1.1
3,304,692	+		PGA1_c31640	0.20	+1.0
3,304,692	+		PGA1_c31640	0.20	-1.3
3,304,736	+		PGA1_c31640	0.28	-0.7
3,304,744	-		PGA1_c31640	0.29	-1.0
3,304,751	+		PGA1_c31640	0.30	-0.4
3,304,815	+		PGA1_c31640	0.40	-1.0
3,304,874	+		PGA1_c31640	0.50	-1.7
3,304,875	+		PGA1_c31640	0.50	-2.0
3,304,905	+		PGA1_c31640	0.55	+0.9
3,304,999	+		PGA1_c31640	0.70	-1.6
3,305,009	+		PGA1_c31640	0.71	-0.9
3,305,017	-		PGA1_c31640	0.73	-2.3
3,305,112	+		PGA1_c31640	0.88	-2.6
3,305,123	+		PGA1_c31640	0.90	-0.1
3,305,123	+		PGA1_c31640	0.90	+0.9
3,305,128	+				-1.1
3,305,130	-				-1.0
3,305,130	-				-1.0
3,305,131	-				+0.2
3,305,131	-				-0.2
3,305,136	-				+0.1
3,305,189	-				-1.1
3,305,204	+				+0.6
3,305,212	-				-0.4
3,305,287	-		PGA1_c31650	0.11	+0.6
3,305,315	+		PGA1_c31650	0.14	-0.3
3,305,315	+		PGA1_c31650	0.14	-0.3
3,305,315	+		PGA1_c31650	0.14	-1.6
3,305,323	-		PGA1_c31650	0.15	+0.9
3,305,323	-		PGA1_c31650	0.15	-0.2
3,305,331	-		PGA1_c31650	0.16	+1.1
3,305,358	-		PGA1_c31650	0.19	-1.8
3,305,358	-		PGA1_c31650	0.19	+0.5
3,305,359	-		PGA1_c31650	0.19	-1.3
3,305,398	+		PGA1_c31650	0.23	+0.2
3,305,406	-		PGA1_c31650	0.24	-1.4
3,305,406	-		PGA1_c31650	0.24	+0.4
3,305,409	+		PGA1_c31650	0.25	-0.3
3,305,428	+		PGA1_c31650	0.27	-3.3
3,305,465	-		PGA1_c31650	0.31	+0.6
3,305,466	-		PGA1_c31650	0.31	+0.2
3,305,543	-		PGA1_c31650	0.39	-0.2
3,305,549	+		PGA1_c31650	0.40	-1.9
3,305,549	+		PGA1_c31650	0.40	-0.1
3,305,549	+		PGA1_c31650	0.40	+0.8
3,305,571	+		PGA1_c31650	0.42	+0.9
3,305,579	+		PGA1_c31650	0.43	+0.5
3,305,634	-		PGA1_c31650	0.49	+0.0
3,305,740	+		PGA1_c31650	0.61	+0.3
3,305,740	+		PGA1_c31650	0.61	-1.1
3,305,750	+		PGA1_c31650	0.62	+0.5
3,305,765	-		PGA1_c31650	0.63	+0.2
3,305,767	-		PGA1_c31650	0.64	-2.0
3,305,770	+		PGA1_c31650	0.64	-0.4
3,305,773	-		PGA1_c31650	0.64	+0.0
3,305,780	-		PGA1_c31650	0.65	+0.5
3,305,780	-		PGA1_c31650	0.65	+0.7
3,305,780	-		PGA1_c31650	0.65	-1.7
3,305,787	+		PGA1_c31650	0.66	-1.3
3,305,795	-		PGA1_c31650	0.67	-1.5
3,305,795	-		PGA1_c31650	0.67	+0.9
3,305,797	+		PGA1_c31650	0.67	+0.1
3,305,805	-		PGA1_c31650	0.68	-2.3
3,305,828	+		PGA1_c31650	0.70	+0.1
3,305,836	-		PGA1_c31650	0.71	+1.2
3,305,836	-		PGA1_c31650	0.71	-0.9
3,305,882	-		PGA1_c31650	0.76	+0.5
3,305,896	-		PGA1_c31650	0.78	-0.9
3,305,900	+		PGA1_c31650	0.78	-2.6
3,305,900	+		PGA1_c31650	0.78	-0.8
3,305,900	+		PGA1_c31650	0.78	-0.1
3,305,908	-		PGA1_c31650	0.79	+2.2
3,305,908	-		PGA1_c31650	0.79	+0.9
3,305,908	-		PGA1_c31650	0.79	-3.0
3,305,997	-		PGA1_c31650	0.88	-0.4
3,306,007	-		PGA1_c31650	0.90	-0.5
3,306,008	-		PGA1_c31650	0.90	-1.2
3,306,014	+				+0.0
3,306,044	+				+0.3
3,306,046	+				-0.4
3,306,052	+				+0.1
3,306,128	+				-1.3