Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29480

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
3,080,540	+				+0.7
3,080,579	-				-0.6
3,080,607	+				+0.3
3,080,718	-				-0.8
3,080,724	+				+1.0
3,080,724	+				+0.2
3,080,732	-				-1.0
3,080,732	-				-0.3
3,080,734	+				+1.2
3,080,742	-				+0.0
3,080,746	+				+0.2
3,080,778	+				+0.4
3,080,778	+				-0.6
3,080,815	-				+1.4
3,080,892	+		PGA1_c29470	0.18	+0.1
3,080,971	-		PGA1_c29470	0.33	+0.1
3,081,050	-		PGA1_c29470	0.47	-1.0
3,081,101	-		PGA1_c29470	0.56	+2.3
3,081,145	-		PGA1_c29470	0.64	-1.3
3,081,150	+		PGA1_c29470	0.65	-1.0
3,081,153	-		PGA1_c29470	0.65	+0.0
3,081,160	+		PGA1_c29470	0.67	-2.5
3,081,160	+		PGA1_c29470	0.67	-0.7
3,081,167	-		PGA1_c29470	0.68	-0.7
3,081,168	-		PGA1_c29470	0.68	-0.5
3,081,168	-		PGA1_c29470	0.68	-0.7
3,081,170	+		PGA1_c29470	0.68	+0.2
3,081,170	+		PGA1_c29470	0.68	+0.5
3,081,250	-		PGA1_c29470	0.83	-1.3
3,081,267	-		PGA1_c29470	0.86	-1.3
3,081,267	-		PGA1_c29470	0.86	+1.0
3,081,274	+		PGA1_c29470	0.87	-1.4
3,081,282	-		PGA1_c29470	0.89	-0.1
3,081,282	-		PGA1_c29470	0.89	-1.2
3,081,380	+				+0.4
3,081,550	+				+0.7
3,081,556	+				+0.3
3,081,585	+				+0.5
3,081,587	+				-0.4
3,081,616	+		PGA1_c29480	0.10	-0.5
3,081,624	-		PGA1_c29480	0.11	+0.4
3,081,648	+		PGA1_c29480	0.13	+0.2
3,081,650	-		PGA1_c29480	0.13	-0.9
3,081,653	+		PGA1_c29480	0.13	+0.6
3,081,653	+		PGA1_c29480	0.13	+0.7
3,081,661	-		PGA1_c29480	0.14	-1.8
3,081,661	-		PGA1_c29480	0.14	-1.6
3,081,666	-		PGA1_c29480	0.14	+0.2
3,081,709	+		PGA1_c29480	0.18	-0.9
3,081,709	+		PGA1_c29480	0.18	-3.2
3,081,711	-		PGA1_c29480	0.18	+0.8
3,081,717	-		PGA1_c29480	0.18	-0.8
3,081,717	-		PGA1_c29480	0.18	-1.6
3,081,717	-		PGA1_c29480	0.18	+0.5
3,081,717	-		PGA1_c29480	0.18	-0.7
3,081,717	-		PGA1_c29480	0.18	-0.7
3,081,724	-		PGA1_c29480	0.19	-0.9
3,081,779	+		PGA1_c29480	0.24	-0.6
3,081,784	+		PGA1_c29480	0.24	-1.3
3,081,789	+		PGA1_c29480	0.24	-0.8
3,081,792	-		PGA1_c29480	0.25	+0.0
3,081,797	+		PGA1_c29480	0.25	+1.3
3,081,838	+		PGA1_c29480	0.29	+0.7
3,081,846	-		PGA1_c29480	0.29	+0.7
3,081,870	-		PGA1_c29480	0.31	+0.0
3,081,870	-		PGA1_c29480	0.31	-0.5
3,081,875	-		PGA1_c29480	0.32	-0.1
3,081,894	+		PGA1_c29480	0.33	+1.4
3,081,894	+		PGA1_c29480	0.33	-1.0
3,081,894	+		PGA1_c29480	0.33	+1.0
3,081,935	+		PGA1_c29480	0.37	-0.3
3,081,935	+		PGA1_c29480	0.37	-0.5
3,081,943	-		PGA1_c29480	0.37	+0.2
3,082,001	-		PGA1_c29480	0.42	-2.5
3,082,032	+		PGA1_c29480	0.45	+0.3
3,082,037	+		PGA1_c29480	0.45	-2.6
3,082,037	+		PGA1_c29480	0.45	+0.6
3,082,040	-		PGA1_c29480	0.45	-0.2
3,082,047	+		PGA1_c29480	0.46	+0.2
3,082,065	+		PGA1_c29480	0.47	+0.9
3,082,126	+		PGA1_c29480	0.52	-2.2
3,082,131	+		PGA1_c29480	0.53	-0.4
3,082,131	+		PGA1_c29480	0.53	+0.5
3,082,134	-		PGA1_c29480	0.53	-0.4
3,082,139	-		PGA1_c29480	0.53	+0.9
3,082,139	-		PGA1_c29480	0.53	-1.0
3,082,190	-		PGA1_c29480	0.58	-0.7
3,082,224	+		PGA1_c29480	0.61	-0.1
3,082,230	+		PGA1_c29480	0.61	+0.4
3,082,234	+		PGA1_c29480	0.61	-0.2
3,082,290	+		PGA1_c29480	0.66	-3.1
3,082,298	+		PGA1_c29480	0.67	+0.4
3,082,310	+		PGA1_c29480	0.68	+0.8
3,082,310	+		PGA1_c29480	0.68	-0.4
3,082,342	+		PGA1_c29480	0.70	-1.3
3,082,342	+		PGA1_c29480	0.70	-0.3
3,082,350	-		PGA1_c29480	0.71	-0.0
3,082,350	-		PGA1_c29480	0.71	+0.4
3,082,369	+		PGA1_c29480	0.73	-0.5
3,082,387	-		PGA1_c29480	0.74	-0.7
3,082,387	-		PGA1_c29480	0.74	-0.3
3,082,387	-		PGA1_c29480	0.74	+0.3
3,082,390	-		PGA1_c29480	0.74	-0.1
3,082,485	-		PGA1_c29480	0.82	+0.0
3,082,485	-		PGA1_c29480	0.82	-0.3
3,082,511	-		PGA1_c29480	0.84	-0.1
3,082,538	+		PGA1_c29480	0.87	-0.3
3,082,546	-		PGA1_c29480	0.87	+0.2
3,082,546	-		PGA1_c29480	0.87	+0.7
3,082,556	-		PGA1_c29480	0.88	-0.5
3,082,556	-		PGA1_c29480	0.88	-1.6
3,082,556	-		PGA1_c29480	0.88	-0.4
3,082,676	+				-0.3
3,082,693	+				-1.2
3,082,701	-				-1.7
3,082,716	+				+1.2
3,082,962	-				-1.3
3,082,962	-				-2.5
3,082,982	+				-1.2
3,083,075	+		PGA1_c29490	0.14	+0.1
3,083,092	-		PGA1_c29490	0.15	-0.7
3,083,106	+		PGA1_c29490	0.16	+0.4
3,083,486	-		PGA1_c29490	0.36	+0.1
3,083,588	-		PGA1_c29490	0.42	+0.7
3,083,588	-		PGA1_c29490	0.42	+0.4
3,083,612	-		PGA1_c29490	0.43	-1.3