Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27600

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
2,873,185	-		PGA1_c27580	0.83	+0.3
2,873,301	-				-0.0
2,873,302	+				-0.2
2,873,317	+				+0.0
2,873,317	+				-1.0
2,873,342	+				-0.4
2,873,450	+		PGA1_c27590	0.20	+0.4
2,873,493	+		PGA1_c27590	0.25	-0.7
2,873,501	-		PGA1_c27590	0.27	-1.2
2,873,510	+		PGA1_c27590	0.28	-0.5
2,873,553	+		PGA1_c27590	0.34	-0.7
2,873,569	+		PGA1_c27590	0.36	+2.4
2,873,577	-		PGA1_c27590	0.37	-0.8
2,873,577	-		PGA1_c27590	0.37	-0.4
2,873,604	+		PGA1_c27590	0.41	-0.4
2,873,605	+		PGA1_c27590	0.41	-0.3
2,873,648	+		PGA1_c27590	0.47	-1.0
2,873,656	-		PGA1_c27590	0.48	-1.6
2,873,657	-		PGA1_c27590	0.48	-1.7
2,873,686	+		PGA1_c27590	0.52	+0.3
2,873,701	-		PGA1_c27590	0.54	-1.3
2,873,732	-		PGA1_c27590	0.58	+0.3
2,873,764	+		PGA1_c27590	0.63	-0.7
2,873,822	-		PGA1_c27590	0.71	+1.0
2,873,862	-		PGA1_c27590	0.76	+0.2
2,873,870	-		PGA1_c27590	0.77	-0.6
2,873,925	+		PGA1_c27590	0.85	-0.9
2,873,928	-		PGA1_c27590	0.85	-1.9
2,873,929	+		PGA1_c27590	0.86	-0.1
2,873,933	-		PGA1_c27590	0.86	-1.6
2,873,933	-		PGA1_c27590	0.86	+0.2
2,873,953	-		PGA1_c27590	0.89	+0.4
2,873,976	+				+0.8
2,873,976	+				-3.2
2,873,976	+				-2.0
2,874,059	-				-1.3
2,874,059	-				+0.0
2,874,061	+				-0.3
2,874,113	+				-1.2
2,874,113	+				+0.4
2,874,113	-				+0.5
2,874,119	+				-1.7
2,874,138	-				-0.2
2,874,147	+				+0.1
2,874,186	+				-1.2
2,874,186	+				+1.0
2,874,240	-				-0.7
2,874,278	-				-0.2
2,874,365	+		PGA1_c27600	0.10	-0.2
2,874,394	+		PGA1_c27600	0.12	+0.3
2,874,394	+		PGA1_c27600	0.12	-0.5
2,874,492	-		PGA1_c27600	0.16	-0.1
2,874,518	+		PGA1_c27600	0.18	+0.5
2,874,518	+		PGA1_c27600	0.18	-0.5
2,874,542	+		PGA1_c27600	0.19	-0.6
2,874,542	+		PGA1_c27600	0.19	-0.5
2,874,602	-		PGA1_c27600	0.22	-0.1
2,874,602	-		PGA1_c27600	0.22	-1.3
2,874,701	+		PGA1_c27600	0.27	-0.4
2,874,754	-		PGA1_c27600	0.30	-1.0
2,874,826	+		PGA1_c27600	0.33	+0.3
2,874,880	+		PGA1_c27600	0.36	-0.6
2,874,888	-		PGA1_c27600	0.37	+0.8
2,874,888	-		PGA1_c27600	0.37	-0.2
2,874,898	-		PGA1_c27600	0.37	-0.1
2,874,920	+		PGA1_c27600	0.38	+1.1
2,874,935	+		PGA1_c27600	0.39	+0.1
2,874,952	+		PGA1_c27600	0.40	+0.8
2,874,952	+		PGA1_c27600	0.40	+1.2
2,874,960	-		PGA1_c27600	0.40	-0.5
2,874,960	-		PGA1_c27600	0.40	+0.7
2,874,960	-		PGA1_c27600	0.40	+0.3
2,874,974	+		PGA1_c27600	0.41	+0.3
2,874,992	+		PGA1_c27600	0.42	-1.4
2,875,010	-		PGA1_c27600	0.43	-1.0
2,875,122	+		PGA1_c27600	0.48	-0.6
2,875,127	+		PGA1_c27600	0.49	+0.1
2,875,127	+		PGA1_c27600	0.49	-0.7
2,875,132	-		PGA1_c27600	0.49	-1.4
2,875,135	-		PGA1_c27600	0.49	-1.4
2,875,140	-		PGA1_c27600	0.49	-0.7
2,875,199	+		PGA1_c27600	0.52	-0.7
2,875,201	-		PGA1_c27600	0.52	+0.5
2,875,209	+		PGA1_c27600	0.53	-0.7
2,875,214	-		PGA1_c27600	0.53	-1.6
2,875,282	-		PGA1_c27600	0.57	+0.2
2,875,307	+		PGA1_c27600	0.58	-0.2
2,875,354	-		PGA1_c27600	0.60	-0.9
2,875,364	+		PGA1_c27600	0.61	-3.2
2,875,364	+		PGA1_c27600	0.61	-1.1
2,875,364	+		PGA1_c27600	0.61	+0.3
2,875,374	+		PGA1_c27600	0.61	-0.3
2,875,374	+		PGA1_c27600	0.61	-0.3
2,875,374	+		PGA1_c27600	0.61	-1.1
2,875,374	+		PGA1_c27600	0.61	-0.2
2,875,374	+		PGA1_c27600	0.61	-1.8
2,875,374	+		PGA1_c27600	0.61	+0.3
2,875,374	+		PGA1_c27600	0.61	-0.6
2,875,374	+		PGA1_c27600	0.61	-2.2
2,875,374	+		PGA1_c27600	0.61	-0.7
2,875,374	+		PGA1_c27600	0.61	+0.0
2,875,382	-		PGA1_c27600	0.62	-0.4
2,875,382	-		PGA1_c27600	0.62	-0.0
2,875,402	+		PGA1_c27600	0.63	-0.7
2,875,600	+		PGA1_c27600	0.73	-1.3
2,875,608	-		PGA1_c27600	0.73	-0.6
2,875,632	-		PGA1_c27600	0.74	+0.0
2,875,657	-		PGA1_c27600	0.76	-0.0
2,875,664	-		PGA1_c27600	0.76	+1.1
2,875,698	+		PGA1_c27600	0.78	+0.0
2,875,698	+		PGA1_c27600	0.78	+1.8
2,875,698	+		PGA1_c27600	0.78	-0.9
2,875,698	+		PGA1_c27600	0.78	-0.2
2,875,698	+		PGA1_c27600	0.78	+0.1
2,875,706	-		PGA1_c27600	0.78	-0.9
2,875,706	-		PGA1_c27600	0.78	-0.8
2,875,706	-		PGA1_c27600	0.78	+0.1
2,875,706	-		PGA1_c27600	0.78	+1.1
2,875,706	-		PGA1_c27600	0.78	-0.8
2,875,764	+		PGA1_c27600	0.81	-1.4
2,875,799	-		PGA1_c27600	0.83	-1.1
2,875,845	+		PGA1_c27600	0.85	-0.7
2,875,848	-		PGA1_c27600	0.85	-0.7
2,875,859	+		PGA1_c27600	0.86	-1.0
2,875,912	-		PGA1_c27600	0.89	+0.8
2,875,913	-		PGA1_c27600	0.89	-0.3
2,876,019	+				-0.0
2,876,032	-				+0.6
2,876,238	+				-1.0
2,876,256	+				-0.6
2,876,269	+				+0.1
2,876,279	-				-3.7
2,876,324	-				-0.2
2,876,359	-		PGA1_c27610	0.12	-0.6
2,876,368	+		PGA1_c27610	0.13	+0.4
2,876,388	+		PGA1_c27610	0.14	-0.5
2,876,396	-		PGA1_c27610	0.15	-1.3
2,876,517	+		PGA1_c27610	0.24	+2.1
2,876,588	+		PGA1_c27610	0.29	+0.1
2,876,602	+		PGA1_c27610	0.30	-0.9
2,876,747	+		PGA1_c27610	0.41	-2.2
2,876,747	+		PGA1_c27610	0.41	-0.6
2,876,777	-		PGA1_c27610	0.43	+0.8
2,876,798	-		PGA1_c27610	0.45	-1.2
2,876,849	+		PGA1_c27610	0.48	-0.7
2,876,849	+		PGA1_c27610	0.48	-0.4
2,876,849	+		PGA1_c27610	0.48	+0.3
2,876,867	-		PGA1_c27610	0.50	-3.0
2,876,874	+		PGA1_c27610	0.50	-1.2
2,876,878	-		PGA1_c27610	0.50	+1.4
2,876,919	-		PGA1_c27610	0.53	-1.0
2,876,989	-		PGA1_c27610	0.59	-0.8
2,876,991	+		PGA1_c27610	0.59	+0.7
2,876,991	-		PGA1_c27610	0.59	+1.2
2,876,999	-		PGA1_c27610	0.59	+0.7
2,876,999	-		PGA1_c27610	0.59	+0.4
2,876,999	-		PGA1_c27610	0.59	-0.7
2,876,999	-		PGA1_c27610	0.59	-1.0
2,877,001	+		PGA1_c27610	0.59	-1.5
2,877,004	-		PGA1_c27610	0.60	-0.5
2,877,020	-		PGA1_c27610	0.61	-2.9
2,877,059	+		PGA1_c27610	0.64	-0.3
2,877,075	+		PGA1_c27610	0.65	-0.7
2,877,106	+		PGA1_c27610	0.67	-1.2