Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27320

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
2,845,808	-		PGA1_c27310	0.18	+1.0
2,845,845	+		PGA1_c27310	0.22	-1.0
2,845,876	+		PGA1_c27310	0.25	-1.7
2,845,949	-		PGA1_c27310	0.33	+0.1
2,845,950	-		PGA1_c27310	0.33	-0.1
2,845,962	+		PGA1_c27310	0.34	-0.5
2,845,985	+		PGA1_c27310	0.36	-1.9
2,845,995	+		PGA1_c27310	0.37	+0.2
2,845,998	-		PGA1_c27310	0.37	-1.2
2,845,998	-		PGA1_c27310	0.37	+0.8
2,846,020	-		PGA1_c27310	0.40	-0.2
2,846,067	-		PGA1_c27310	0.44	+0.3
2,846,254	-		PGA1_c27310	0.63	+0.7
2,846,272	-		PGA1_c27310	0.65	+1.3
2,846,274	-		PGA1_c27310	0.65	-0.3
2,846,296	+		PGA1_c27310	0.67	-0.6
2,846,361	-		PGA1_c27310	0.74	+1.8
2,846,439	-		PGA1_c27310	0.81	-0.3
2,846,439	-		PGA1_c27310	0.81	-0.4
2,846,578	+				-2.2
2,846,696	-				+1.0
2,846,702	+				-1.5
2,846,773	-				+0.5
2,846,773	-				+0.3
2,846,773	-				+0.0
2,846,773	-				-0.2
2,846,773	-				-0.4
2,846,791	+				-0.7
2,846,809	-				+0.1
2,846,984	-		PGA1_c27320	0.22	-0.4
2,847,005	+		PGA1_c27320	0.24	-2.0
2,847,005	+		PGA1_c27320	0.24	+0.1
2,847,011	-		PGA1_c27320	0.24	+2.5
2,847,040	+		PGA1_c27320	0.27	-0.4
2,847,053	+		PGA1_c27320	0.28	+0.3
2,847,068	+		PGA1_c27320	0.30	+0.2
2,847,076	-		PGA1_c27320	0.30	-2.7
2,847,076	-		PGA1_c27320	0.30	+1.0
2,847,124	-		PGA1_c27320	0.35	+0.5
2,847,184	+		PGA1_c27320	0.41	-0.3
2,847,184	+		PGA1_c27320	0.41	-0.0
2,847,184	+		PGA1_c27320	0.41	-0.3
2,847,184	+		PGA1_c27320	0.41	+1.2
2,847,184	+		PGA1_c27320	0.41	+0.2
2,847,192	-		PGA1_c27320	0.41	-1.3
2,847,192	-		PGA1_c27320	0.41	+0.0
2,847,192	-		PGA1_c27320	0.41	-1.9
2,847,192	-		PGA1_c27320	0.41	-0.0
2,847,192	-		PGA1_c27320	0.41	-1.0
2,847,248	-		PGA1_c27320	0.47	+0.5
2,847,273	-		PGA1_c27320	0.49	+0.6
2,847,296	+		PGA1_c27320	0.51	-1.8
2,847,296	+		PGA1_c27320	0.51	+0.2
2,847,296	+		PGA1_c27320	0.51	+0.0
2,847,296	+		PGA1_c27320	0.51	+0.4
2,847,304	-		PGA1_c27320	0.52	-1.1
2,847,304	-		PGA1_c27320	0.52	+0.1
2,847,314	-		PGA1_c27320	0.53	+0.4
2,847,353	+		PGA1_c27320	0.57	-0.7
2,847,378	+		PGA1_c27320	0.59	-0.9
2,847,394	-		PGA1_c27320	0.61	-2.5
2,847,399	+		PGA1_c27320	0.61	-1.2
2,847,612	+		PGA1_c27320	0.81	+0.3
2,847,624	+		PGA1_c27320	0.82	-0.4
2,847,632	-		PGA1_c27320	0.83	-0.2
2,847,672	+		PGA1_c27320	0.87	-1.3
2,847,687	+		PGA1_c27320	0.88	-1.3
2,847,702	+		PGA1_c27320	0.90	-0.2
2,847,795	+				+0.7
2,847,795	-				-0.0
2,847,876	+				-0.9
2,847,930	+				+0.4
2,847,941	+				+0.1
2,847,954	+				+0.7
2,847,962	-				+1.2
2,847,980	+				+0.6
2,847,980	+				+0.5
2,847,988	-				-1.6
2,847,988	-				-2.7
2,848,032	+		PGA1_c27330	0.11	-1.2
2,848,045	-		PGA1_c27330	0.12	-1.2
2,848,048	-		PGA1_c27330	0.12	+0.1
2,848,048	-		PGA1_c27330	0.12	+0.6
2,848,055	+		PGA1_c27330	0.13	-2.2
2,848,055	+		PGA1_c27330	0.13	-1.0
2,848,055	+		PGA1_c27330	0.13	-0.7
2,848,063	-		PGA1_c27330	0.14	+0.1
2,848,063	-		PGA1_c27330	0.14	+0.3
2,848,067	+		PGA1_c27330	0.14	-0.9
2,848,096	-		PGA1_c27330	0.16	+0.8
2,848,122	+		PGA1_c27330	0.18	-0.7
2,848,130	-		PGA1_c27330	0.19	-0.8
2,848,130	-		PGA1_c27330	0.19	+0.1
2,848,186	-		PGA1_c27330	0.24	-0.7
2,848,222	-		PGA1_c27330	0.26	+0.8
2,848,224	-		PGA1_c27330	0.27	+0.3
2,848,233	+		PGA1_c27330	0.27	-1.7
2,848,234	-		PGA1_c27330	0.27	-1.2
2,848,239	-		PGA1_c27330	0.28	-1.4
2,848,259	+		PGA1_c27330	0.30	-0.0
2,848,267	-		PGA1_c27330	0.30	-1.0
2,848,330	+		PGA1_c27330	0.35	+0.2
2,848,330	+		PGA1_c27330	0.35	+0.1
2,848,330	+		PGA1_c27330	0.35	+0.7
2,848,330	+		PGA1_c27330	0.35	+1.0
2,848,330	+		PGA1_c27330	0.35	-0.5
2,848,338	-		PGA1_c27330	0.36	-0.6
2,848,338	-		PGA1_c27330	0.36	+1.3
2,848,351	+		PGA1_c27330	0.37	+1.3
2,848,351	+		PGA1_c27330	0.37	-2.7
2,848,356	-		PGA1_c27330	0.37	+1.4
2,848,369	-		PGA1_c27330	0.38	-0.3
2,848,401	-		PGA1_c27330	0.41	-0.0
2,848,439	-		PGA1_c27330	0.44	+0.3
2,848,439	-		PGA1_c27330	0.44	+0.4
2,848,467	-		PGA1_c27330	0.46	-0.8
2,848,486	+		PGA1_c27330	0.48	-1.0
2,848,509	-		PGA1_c27330	0.50	+1.5
2,848,519	+		PGA1_c27330	0.51	-0.9
2,848,519	+		PGA1_c27330	0.51	-1.7
2,848,527	-		PGA1_c27330	0.51	+0.0
2,848,527	-		PGA1_c27330	0.51	-0.9
2,848,529	+		PGA1_c27330	0.52	+0.5
2,848,529	+		PGA1_c27330	0.52	+1.8
2,848,577	-		PGA1_c27330	0.55	+0.1
2,848,674	-		PGA1_c27330	0.63	-0.3
2,848,674	-		PGA1_c27330	0.63	-2.6
2,848,709	+		PGA1_c27330	0.66	-1.5
2,848,762	+		PGA1_c27330	0.70	+0.6
2,848,762	+		PGA1_c27330	0.70	+2.8
2,848,762	+		PGA1_c27330	0.70	-0.7
2,848,767	+		PGA1_c27330	0.71	-0.2
2,848,770	-		PGA1_c27330	0.71	-0.6
2,848,770	-		PGA1_c27330	0.71	+1.8
2,848,770	-		PGA1_c27330	0.71	-2.5
2,848,772	+		PGA1_c27330	0.71	+0.2
2,848,775	-		PGA1_c27330	0.72	+0.5
2,848,783	+		PGA1_c27330	0.72	-0.5