Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27030

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
2,817,102	-				+1.9
2,817,113	+				+1.3
2,817,134	+				+0.9
2,817,147	+				-1.1
2,817,155	-				+0.9
2,817,156	+				+0.9
2,817,164	-				+1.7
2,817,174	-				+0.4
2,817,245	+		PGA1_c27010	0.21	+1.1
2,817,256	+		PGA1_c27010	0.23	+1.9
2,817,258	-		PGA1_c27010	0.23	+0.6
2,817,258	-		PGA1_c27010	0.23	+2.9
2,817,321	+		PGA1_c27010	0.35	+1.9
2,817,382	+		PGA1_c27010	0.46	+0.5
2,817,552	+		PGA1_c27010	0.76	+0.6
2,817,555	-		PGA1_c27010	0.77	+0.5
2,817,562	-		PGA1_c27010	0.78	+0.1
2,817,575	+		PGA1_c27010	0.81	+0.9
2,817,580	+		PGA1_c27010	0.81	-0.1
2,817,624	-		PGA1_c27010	0.89	-0.1
2,817,674	-				+0.3
2,817,718	-				+0.3
2,817,725	+		PGA1_c27020	0.10	-1.2
2,817,783	+		PGA1_c27020	0.25	+0.7
2,817,791	-		PGA1_c27020	0.27	-0.1
2,817,805	+		PGA1_c27020	0.30	+1.5
2,817,861	-		PGA1_c27020	0.44	+2.9
2,817,877	-		PGA1_c27020	0.47	-1.1
2,817,919	-		PGA1_c27020	0.58	+0.3
2,818,005	+		PGA1_c27020	0.79	+0.9
2,818,064	+				+1.1
2,818,064	+				+0.9
2,818,072	-				-0.1
2,818,081	+				-0.1
2,818,089	-				-1.0
2,818,089	-				-0.1
2,818,103	-				-1.1
2,818,135	-				-0.1
2,818,137	+				-0.3
2,818,145	-				+0.9
2,818,145	-				-1.1
2,818,147	+				+0.1
2,818,155	-				-0.1
2,818,155	-				-0.1
2,818,212	-		PGA1_c27030	0.17	-1.7
2,818,217	+		PGA1_c27030	0.18	+0.9
2,818,260	-		PGA1_c27030	0.24	-0.7
2,818,331	-		PGA1_c27030	0.33	+1.0
2,818,331	-		PGA1_c27030	0.33	-2.6
2,818,336	-		PGA1_c27030	0.34	+0.3
2,818,336	-		PGA1_c27030	0.34	+0.9
2,818,532	+		PGA1_c27030	0.61	+0.9
2,818,540	-		PGA1_c27030	0.62	-0.7
2,818,558	-		PGA1_c27030	0.64	-0.1
2,818,558	-		PGA1_c27030	0.64	-1.1
2,818,600	-		PGA1_c27030	0.70	-1.1
2,818,608	-		PGA1_c27030	0.71	-0.3
2,818,625	+		PGA1_c27030	0.73	-2.3
2,818,635	+		PGA1_c27030	0.75	-0.9
2,818,777	+				+0.3
2,818,777	+				+2.5
2,818,785	-				-0.1
2,818,807	-				+0.9
2,818,818	+				-1.4
2,818,826	-				-1.4
2,818,834	+				+2.5
2,818,842	-				+1.9
2,818,842	-				-1.4
2,818,842	-				+0.9
2,818,853	-				+0.5
2,818,855	+				-0.1
2,818,938	+				-0.8
2,818,941	-				+0.3
2,818,941	-				-0.7
2,818,944	+				+1.2
2,818,944	+				-0.1
2,818,944	+				+0.9
2,818,949	+				-0.7
2,819,052	+		PGA1_c27040	0.16	-0.7
2,819,079	+		PGA1_c27040	0.19	-1.3
2,819,087	+		PGA1_c27040	0.20	+0.4
2,819,130	+		PGA1_c27040	0.24	+0.1
2,819,181	-		PGA1_c27040	0.29	+0.4
2,819,226	+		PGA1_c27040	0.33	+0.6
2,819,229	-		PGA1_c27040	0.34	+2.5
2,819,248	-		PGA1_c27040	0.35	+0.1
2,819,252	+		PGA1_c27040	0.36	-1.1
2,819,269	-		PGA1_c27040	0.37	-1.1
2,819,288	-		PGA1_c27040	0.39	+1.0
2,819,449	+		PGA1_c27040	0.55	+2.2
2,819,455	-		PGA1_c27040	0.56	-0.1
2,819,485	+		PGA1_c27040	0.59	-1.5
2,819,490	+		PGA1_c27040	0.59	+0.9
2,819,493	-		PGA1_c27040	0.59	+1.6
2,819,493	-		PGA1_c27040	0.59	+0.9
2,819,495	+		PGA1_c27040	0.60	+0.1
2,819,503	-		PGA1_c27040	0.60	-1.1
2,819,531	+		PGA1_c27040	0.63	-1.1
2,819,551	+		PGA1_c27040	0.65	+0.9
2,819,551	+		PGA1_c27040	0.65	-1.1
2,819,559	-		PGA1_c27040	0.66	+1.7
2,819,600	-		PGA1_c27040	0.70	-0.7
2,819,633	-		PGA1_c27040	0.73	+0.9
2,819,741	-		PGA1_c27040	0.84	-0.4
2,819,799	-		PGA1_c27040	0.89	+0.9