Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25450

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
2,648,425	+		PGA1_c25430	0.37	-1.1
2,648,433	-		PGA1_c25430	0.38	+0.2
2,648,470	-		PGA1_c25430	0.40	+1.0
2,648,470	-		PGA1_c25430	0.40	+0.9
2,648,470	-		PGA1_c25430	0.40	-0.9
2,648,498	-		PGA1_c25430	0.42	-0.3
2,648,529	-		PGA1_c25430	0.44	+1.2
2,648,586	+		PGA1_c25430	0.48	-0.2
2,648,586	+		PGA1_c25430	0.48	-0.8
2,648,756	+		PGA1_c25430	0.59	-0.2
2,648,764	-		PGA1_c25430	0.60	-0.4
2,648,769	+		PGA1_c25430	0.60	+0.3
2,648,772	-		PGA1_c25430	0.60	-0.1
2,648,774	+		PGA1_c25430	0.60	-0.4
2,648,777	-		PGA1_c25430	0.60	-0.1
2,648,777	-		PGA1_c25430	0.60	-0.2
2,648,787	+		PGA1_c25430	0.61	-0.1
2,648,872	+		PGA1_c25430	0.67	+1.9
2,648,899	+		PGA1_c25430	0.68	+1.6
2,648,932	+		PGA1_c25430	0.71	-1.5
2,648,957	+		PGA1_c25430	0.72	-0.4
2,648,965	-		PGA1_c25430	0.73	+0.5
2,649,030	+		PGA1_c25430	0.77	-0.3
2,649,038	-		PGA1_c25430	0.78	-1.0
2,649,038	-		PGA1_c25430	0.78	-0.2
2,649,047	-		PGA1_c25430	0.78	-0.9
2,649,148	+		PGA1_c25430	0.85	-0.8
2,649,156	-		PGA1_c25430	0.85	-0.4
2,649,156	-		PGA1_c25430	0.85	+0.3
2,649,160	+		PGA1_c25430	0.86	+0.4
2,649,160	+		PGA1_c25430	0.86	+0.7
2,649,160	+		PGA1_c25430	0.86	+0.8
2,649,168	-		PGA1_c25430	0.86	+1.0
2,649,168	-		PGA1_c25430	0.86	+1.2
2,649,168	-		PGA1_c25430	0.86	+1.7
2,649,168	-		PGA1_c25430	0.86	-0.7
2,649,284	+				-0.2
2,649,284	+				-1.1
2,649,284	+				+0.3
2,649,284	+				+2.5
2,649,292	-				+2.4
2,649,292	-				+0.2
2,649,292	-				-1.9
2,649,292	-				-1.1
2,649,299	+				-1.4
2,649,318	-				+0.2
2,649,382	-				+0.3
2,649,398	-				-1.1
2,649,399	+				+0.5
2,649,524	+				-0.7
2,649,586	-		PGA1_c25450	0.10	-0.8
2,649,591	-		PGA1_c25450	0.10	-0.2
2,649,600	+		PGA1_c25450	0.11	+0.4
2,649,600	+		PGA1_c25450	0.11	-3.5
2,649,610	+		PGA1_c25450	0.12	-0.9
2,649,610	+		PGA1_c25450	0.12	-0.5
2,649,618	-		PGA1_c25450	0.12	-0.9
2,649,645	+		PGA1_c25450	0.14	-1.9
2,649,645	+		PGA1_c25450	0.14	+0.4
2,649,653	-		PGA1_c25450	0.14	-1.6
2,649,653	-		PGA1_c25450	0.14	-1.5
2,649,653	-		PGA1_c25450	0.14	-0.0
2,649,653	-		PGA1_c25450	0.14	-1.4
2,649,653	-		PGA1_c25450	0.14	+0.5
2,649,663	-		PGA1_c25450	0.15	-0.8
2,649,697	-		PGA1_c25450	0.17	-0.8
2,649,706	+		PGA1_c25450	0.17	-0.1
2,649,706	+		PGA1_c25450	0.17	-0.9
2,649,710	-		PGA1_c25450	0.18	+1.0
2,649,803	+		PGA1_c25450	0.23	+0.3
2,649,803	-		PGA1_c25450	0.23	+0.1
2,649,812	+		PGA1_c25450	0.24	+0.3
2,649,812	+		PGA1_c25450	0.24	+1.3
2,649,820	-		PGA1_c25450	0.24	-0.5
2,649,867	+		PGA1_c25450	0.27	+1.1
2,649,948	+		PGA1_c25450	0.32	-1.9
2,649,951	-		PGA1_c25450	0.32	-2.1
2,649,987	+		PGA1_c25450	0.34	+0.1
2,649,987	-		PGA1_c25450	0.34	-0.8
2,649,987	-		PGA1_c25450	0.34	-0.3
2,650,002	-		PGA1_c25450	0.35	+0.8
2,650,039	+		PGA1_c25450	0.37	-0.8
2,650,039	+		PGA1_c25450	0.37	-1.7
2,650,039	+		PGA1_c25450	0.37	-0.8
2,650,044	+		PGA1_c25450	0.38	+0.2
2,650,069	+		PGA1_c25450	0.39	-2.9
2,650,107	+		PGA1_c25450	0.41	-0.9
2,650,115	-		PGA1_c25450	0.42	+1.3
2,650,115	-		PGA1_c25450	0.42	+2.5
2,650,115	-		PGA1_c25450	0.42	-0.7
2,650,182	-		PGA1_c25450	0.46	-0.1
2,650,190	-		PGA1_c25450	0.46	-1.1
2,650,190	-		PGA1_c25450	0.46	+1.4
2,650,190	-		PGA1_c25450	0.46	-0.3
2,650,231	+		PGA1_c25450	0.49	-0.2
2,650,239	-		PGA1_c25450	0.49	-0.3
2,650,256	-		PGA1_c25450	0.50	-0.0
2,650,338	-		PGA1_c25450	0.55	+0.9
2,650,375	+		PGA1_c25450	0.57	-0.9
2,650,421	+		PGA1_c25450	0.60	+0.6
2,650,427	-		PGA1_c25450	0.61	-1.3
2,650,451	-		PGA1_c25450	0.62	+0.2
2,650,462	-		PGA1_c25450	0.63	+0.2
2,650,473	+		PGA1_c25450	0.63	-0.9
2,650,545	+		PGA1_c25450	0.68	-2.1
2,650,584	+		PGA1_c25450	0.70	-0.8
2,650,594	+		PGA1_c25450	0.71	+1.4
2,650,665	-		PGA1_c25450	0.75	-1.7
2,650,673	-		PGA1_c25450	0.75	-2.5
2,650,716	+		PGA1_c25450	0.78	+0.3
2,650,716	+		PGA1_c25450	0.78	-0.3
2,650,747	-		PGA1_c25450	0.80	-1.1
2,650,786	+		PGA1_c25450	0.82	-0.0
2,650,792	+		PGA1_c25450	0.82	+1.2
2,650,827	+		PGA1_c25450	0.85	-0.1
2,650,832	+		PGA1_c25450	0.85	+0.2
2,650,832	+		PGA1_c25450	0.85	-1.9
2,650,833	-		PGA1_c25450	0.85	-0.0
2,650,833	-		PGA1_c25450	0.85	-0.8
2,650,840	-		PGA1_c25450	0.85	-0.8
2,650,961	-				+0.3
2,651,128	-				-1.0
2,651,216	+				-1.7
2,651,216	+				-0.6
2,651,224	-				-1.1
2,651,224	-				+0.5
2,651,224	-				-0.2
2,651,224	-				+0.5
2,651,237	-				-0.5
2,651,264	+				+0.0
2,651,266	+				-0.1
2,651,326	-				-0.2
2,651,384	+		PGA1_c25470	0.14	+1.8
2,651,384	+		PGA1_c25470	0.14	-0.3
2,651,439	+		PGA1_c25470	0.18	-0.3
2,651,455	-		PGA1_c25470	0.19	-0.0
2,651,461	-		PGA1_c25470	0.19	-0.8
2,651,461	-		PGA1_c25470	0.19	-0.7
2,651,508	-		PGA1_c25470	0.23	+1.3
2,651,530	+		PGA1_c25470	0.24	-1.9
2,651,530	+		PGA1_c25470	0.24	-0.5
2,651,556	-		PGA1_c25470	0.26	+0.9
2,651,562	+		PGA1_c25470	0.27	+0.1
2,651,563	-		PGA1_c25470	0.27	-0.8
2,651,570	-		PGA1_c25470	0.27	-0.8
2,651,586	-		PGA1_c25470	0.28	+0.6
2,651,606	+		PGA1_c25470	0.30	+0.8
2,651,642	-		PGA1_c25470	0.32	+0.3
2,651,699	+		PGA1_c25470	0.36	+0.6
2,651,767	+		PGA1_c25470	0.41	+0.2
2,651,784	+		PGA1_c25470	0.42	-1.0
2,651,792	-		PGA1_c25470	0.43	-0.1
2,651,814	+		PGA1_c25470	0.44	-1.1
2,651,814	+		PGA1_c25470	0.44	-0.2
2,651,814	+		PGA1_c25470	0.44	-0.5
2,651,814	+		PGA1_c25470	0.44	-2.1
2,651,814	+		PGA1_c25470	0.44	-0.2
2,651,814	+		PGA1_c25470	0.44	+0.5
2,651,814	+		PGA1_c25470	0.44	-0.1
2,651,820	+		PGA1_c25470	0.45	-0.3
2,651,822	-		PGA1_c25470	0.45	-0.1
2,651,822	-		PGA1_c25470	0.45	-0.2
2,651,829	+		PGA1_c25470	0.45	+0.2
2,651,829	+		PGA1_c25470	0.45	+0.0
2,651,829	+		PGA1_c25470	0.45	+1.1
2,651,829	+		PGA1_c25470	0.45	-1.9
2,651,829	+		PGA1_c25470	0.45	-0.6
2,651,829	+		PGA1_c25470	0.45	+0.3
2,651,829	+		PGA1_c25470	0.45	-2.0
2,651,837	-		PGA1_c25470	0.46	-0.7
2,651,837	-		PGA1_c25470	0.46	+0.4
2,651,837	-		PGA1_c25470	0.46	+0.3
2,651,837	-		PGA1_c25470	0.46	-1.4
2,651,837	-		PGA1_c25470	0.46	-0.1
2,651,837	-		PGA1_c25470	0.46	-0.6
2,651,837	-		PGA1_c25470	0.46	+0.2
2,651,837	-		PGA1_c25470	0.46	+0.8
2,651,837	-		PGA1_c25470	0.46	-0.5
2,651,837	-		PGA1_c25470	0.46	-1.7
2,651,837	-		PGA1_c25470	0.46	+0.1
2,651,839	+		PGA1_c25470	0.46	+0.3
2,651,848	+		PGA1_c25470	0.47	-0.7
2,651,848	+		PGA1_c25470	0.47	-0.3
2,651,848	+		PGA1_c25470	0.47	-0.3
2,651,848	+		PGA1_c25470	0.47	-0.1
2,651,848	+		PGA1_c25470	0.47	+0.5
2,651,848	+		PGA1_c25470	0.47	-1.7
2,651,848	+		PGA1_c25470	0.47	-1.2
2,651,848	+		PGA1_c25470	0.47	-0.1
2,651,848	+		PGA1_c25470	0.47	-1.2
2,651,848	+		PGA1_c25470	0.47	-2.3
2,651,856	-		PGA1_c25470	0.47	+0.5
2,651,952	+		PGA1_c25470	0.54	-1.3
2,651,952	+		PGA1_c25470	0.54	-0.1
2,651,960	-		PGA1_c25470	0.55	+1.2
2,651,960	-		PGA1_c25470	0.55	-0.8
2,651,984	-		PGA1_c25470	0.57	-1.4