Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25360

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
2,641,034	-		PGA1_c25340	0.84	-0.3
2,641,034	-		PGA1_c25340	0.84	+0.4
2,641,094	+				-0.7
2,641,094	+				-1.1
2,641,094	+				-0.9
2,641,097	+				+0.1
2,641,099	+				-0.8
2,641,099	+				+2.4
2,641,099	+				-1.5
2,641,099	+				-2.1
2,641,099	+				-0.2
2,641,102	-				-2.0
2,641,102	-				+0.0
2,641,107	-				-0.4
2,641,107	-				-0.8
2,641,107	-				+0.3
2,641,107	-				+0.2
2,641,142	+				+0.6
2,641,167	-				+0.8
2,641,167	-				+0.1
2,641,186	+				+0.1
2,641,203	-				-1.2
2,641,273	-				+0.1
2,641,273	-				+1.1
2,641,283	-				+1.0
2,641,376	+		PGA1_c25350	0.16	-0.7
2,641,383	-		PGA1_c25350	0.17	-0.2
2,641,384	-		PGA1_c25350	0.17	-1.3
2,641,385	+		PGA1_c25350	0.17	+1.2
2,641,392	+		PGA1_c25350	0.19	+1.2
2,641,393	-		PGA1_c25350	0.19	-0.4
2,641,400	+		PGA1_c25350	0.20	-0.5
2,641,407	-		PGA1_c25350	0.21	+0.9
2,641,408	-		PGA1_c25350	0.21	+0.5
2,641,466	-		PGA1_c25350	0.31	-0.4
2,641,472	-		PGA1_c25350	0.32	-0.1
2,641,472	-		PGA1_c25350	0.32	-0.3
2,641,480	+		PGA1_c25350	0.33	-0.2
2,641,487	+		PGA1_c25350	0.34	-0.1
2,641,502	+		PGA1_c25350	0.37	-0.5
2,641,502	+		PGA1_c25350	0.37	+0.4
2,641,510	-		PGA1_c25350	0.38	+2.6
2,641,584	-		PGA1_c25350	0.50	+0.2
2,641,635	-		PGA1_c25350	0.58	+1.1
2,641,635	-		PGA1_c25350	0.58	+0.7
2,641,669	-		PGA1_c25350	0.64	-1.0
2,641,782	-		PGA1_c25350	0.82	+1.1
2,641,803	-		PGA1_c25350	0.86	-0.8
2,641,865	+				+0.6
2,641,902	+				-1.0
2,641,902	+				-0.4
2,641,935	+				-0.4
2,641,935	+				-0.0
2,641,981	+				+0.9
2,641,981	+				+2.2
2,641,981	+				+0.0
2,641,981	+				+0.9
2,641,981	+				-0.5
2,641,989	-				-1.5
2,641,989	-				-1.0
2,641,989	-				+0.3
2,641,989	-				+0.9
2,641,989	-				-1.7
2,641,989	-				+0.1
2,641,989	-				-0.5
2,642,034	+				+0.9
2,642,034	+				-0.3
2,642,034	+				-0.3
2,642,034	+				+0.3
2,642,036	+				-2.1
2,642,042	-				-1.3
2,642,042	-				-1.4
2,642,042	-				+0.2
2,642,042	-				-0.1
2,642,042	-				-0.1
2,642,064	+				+2.3
2,642,082	+				+0.8
2,642,090	-				-1.3
2,642,098	+				-0.6
2,642,111	+				+3.2
2,642,129	-				-1.1
2,642,174	+		PGA1_c25360	0.13	-1.2
2,642,191	+		PGA1_c25360	0.14	-0.1
2,642,207	-		PGA1_c25360	0.15	+0.7
2,642,232	+		PGA1_c25360	0.17	+0.1
2,642,257	+		PGA1_c25360	0.19	-0.6
2,642,306	+		PGA1_c25360	0.23	-1.4
2,642,352	-		PGA1_c25360	0.27	+1.9
2,642,362	-		PGA1_c25360	0.28	-0.7
2,642,383	+		PGA1_c25360	0.30	-0.2
2,642,391	-		PGA1_c25360	0.31	-1.7
2,642,391	-		PGA1_c25360	0.31	+0.4
2,642,391	-		PGA1_c25360	0.31	+0.7
2,642,391	-		PGA1_c25360	0.31	+0.4
2,642,391	-		PGA1_c25360	0.31	-0.1
2,642,391	-		PGA1_c25360	0.31	+0.2
2,642,402	+		PGA1_c25360	0.31	+1.2
2,642,410	-		PGA1_c25360	0.32	-0.8
2,642,410	-		PGA1_c25360	0.32	+0.1
2,642,410	-		PGA1_c25360	0.32	-2.0
2,642,454	+		PGA1_c25360	0.36	-0.2
2,642,487	+		PGA1_c25360	0.38	-2.5
2,642,524	+		PGA1_c25360	0.42	-1.1
2,642,532	-		PGA1_c25360	0.42	-0.3
2,642,679	-		PGA1_c25360	0.54	+0.4
2,642,679	-		PGA1_c25360	0.54	-0.5
2,642,755	+		PGA1_c25360	0.61	-1.4
2,642,760	+		PGA1_c25360	0.61	+0.2
2,642,808	-		PGA1_c25360	0.65	-0.4
2,642,826	+		PGA1_c25360	0.67	-1.2
2,642,834	-		PGA1_c25360	0.67	+0.3
2,642,843	+		PGA1_c25360	0.68	-0.3
2,642,893	+		PGA1_c25360	0.72	+1.4
2,642,894	+		PGA1_c25360	0.72	-1.6
2,642,894	+		PGA1_c25360	0.72	+0.6
2,642,896	-		PGA1_c25360	0.72	+1.3
2,642,900	+		PGA1_c25360	0.73	+0.3
2,642,900	+		PGA1_c25360	0.73	-0.2
2,642,900	+		PGA1_c25360	0.73	+0.1
2,642,900	+		PGA1_c25360	0.73	-0.1
2,642,900	+		PGA1_c25360	0.73	-0.4
2,642,902	-		PGA1_c25360	0.73	-0.6
2,642,956	-		PGA1_c25360	0.77	-0.8
2,642,991	+		PGA1_c25360	0.80	+2.2
2,642,991	+		PGA1_c25360	0.80	-0.4
2,642,991	+		PGA1_c25360	0.80	-1.7
2,642,991	+		PGA1_c25360	0.80	-0.7
2,642,991	+		PGA1_c25360	0.80	-2.3
2,642,992	+		PGA1_c25360	0.80	+1.1
2,642,992	+		PGA1_c25360	0.80	+1.9
2,642,992	+		PGA1_c25360	0.80	+0.0
2,642,992	+		PGA1_c25360	0.80	-1.7
2,642,999	-		PGA1_c25360	0.81	-2.2
2,642,999	-		PGA1_c25360	0.81	+1.2
2,642,999	-		PGA1_c25360	0.81	+1.2
2,642,999	-		PGA1_c25360	0.81	+0.7
2,642,999	-		PGA1_c25360	0.81	-0.3
2,643,019	-		PGA1_c25360	0.83	+0.8
2,643,047	+		PGA1_c25360	0.85	-0.1
2,643,059	+		PGA1_c25360	0.86	-1.8
2,643,059	+		PGA1_c25360	0.86	-1.9
2,643,059	+		PGA1_c25360	0.86	+0.7
2,643,059	+		PGA1_c25360	0.86	-0.0
2,643,059	+		PGA1_c25360	0.86	+2.0
2,643,059	+		PGA1_c25360	0.86	+0.3
2,643,059	+		PGA1_c25360	0.86	+1.2
2,643,059	+		PGA1_c25360	0.86	-0.7
2,643,059	+		PGA1_c25360	0.86	-1.4
2,643,059	+		PGA1_c25360	0.86	-0.4
2,643,059	+		PGA1_c25360	0.86	+0.5
2,643,067	-		PGA1_c25360	0.87	+0.1
2,643,067	-		PGA1_c25360	0.87	-1.2
2,643,067	-		PGA1_c25360	0.87	-0.7
2,643,067	-		PGA1_c25360	0.87	-0.4
2,643,067	-		PGA1_c25360	0.87	-0.0
2,643,067	-		PGA1_c25360	0.87	-0.2
2,643,067	-		PGA1_c25360	0.87	-0.9
2,643,067	-		PGA1_c25360	0.87	+1.2
2,643,067	-		PGA1_c25360	0.87	-0.2
2,643,067	-		PGA1_c25360	0.87	-0.5
2,643,067	-		PGA1_c25360	0.87	-0.6
2,643,067	-		PGA1_c25360	0.87	-3.0
2,643,067	-		PGA1_c25360	0.87	-0.7
2,643,069	+		PGA1_c25360	0.87	+0.8
2,643,069	+		PGA1_c25360	0.87	-0.8
2,643,069	+		PGA1_c25360	0.87	-0.0
2,643,069	+		PGA1_c25360	0.87	+0.9
2,643,069	+		PGA1_c25360	0.87	+0.3
2,643,069	+		PGA1_c25360	0.87	+1.5
2,643,069	+		PGA1_c25360	0.87	-0.7
2,643,077	-		PGA1_c25360	0.87	-1.3
2,643,077	-		PGA1_c25360	0.87	-1.9
2,643,077	-		PGA1_c25360	0.87	-0.4
2,643,077	-		PGA1_c25360	0.87	-2.1
2,643,077	-		PGA1_c25360	0.87	-0.2
2,643,077	-		PGA1_c25360	0.87	-0.9
2,643,077	-		PGA1_c25360	0.87	-0.0
2,643,077	-		PGA1_c25360	0.87	+0.6
2,643,077	-		PGA1_c25360	0.87	+0.1
2,643,077	-		PGA1_c25360	0.87	+2.1
2,643,077	-		PGA1_c25360	0.87	-1.5
2,643,077	-		PGA1_c25360	0.87	+0.9
2,643,123	+				-0.4
2,643,125	+				+0.1
2,643,131	+				+1.4
2,643,133	+				-0.2
2,643,145	-				-0.6
2,643,148	+				-2.2
2,643,181	+				-0.5
2,643,206	-				+0.2
2,643,241	+				+0.2
2,643,249	-				+1.1
2,643,249	-				-2.1
2,643,249	-				+0.2
2,643,271	+				-1.0
2,643,284	+				-0.1
2,643,284	+				-0.3
2,643,284	+				-2.4
2,643,292	-				-1.2
2,643,292	-				+0.2
2,643,339	-				-0.0
2,643,349	+				-0.5
2,643,349	+				-0.1
2,643,349	+				-0.4
2,643,391	+				-0.7
2,643,408	-				-0.1
2,643,426	-				-0.8
2,643,426	-				-0.1