Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25210

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
2,625,046	-		PGA1_c25190	0.75	+0.6
2,625,098	-		PGA1_c25190	0.79	-0.5
2,625,152	-		PGA1_c25190	0.84	-0.6
2,625,217	-		PGA1_c25190	0.89	+0.8
2,625,249	+				+0.9
2,625,254	+				-2.4
2,625,303	-				-1.1
2,625,340	+				+0.3
2,625,347	+				-0.4
2,625,350	-				-1.5
2,625,361	-				+1.2
2,625,392	-				+0.2
2,625,412	-				+0.5
2,625,421	-				+0.6
2,625,427	-				-0.7
2,625,487	-		PGA1_c25200	0.12	-1.2
2,625,492	-		PGA1_c25200	0.13	+0.2
2,625,492	-		PGA1_c25200	0.13	-0.1
2,625,500	+		PGA1_c25200	0.15	-1.5
2,625,505	+		PGA1_c25200	0.15	-0.1
2,625,513	-		PGA1_c25200	0.17	-0.7
2,625,597	-		PGA1_c25200	0.33	+0.7
2,625,632	-		PGA1_c25200	0.39	-2.1
2,625,638	+		PGA1_c25200	0.40	+2.5
2,625,646	-		PGA1_c25200	0.42	-0.8
2,625,654	-		PGA1_c25200	0.44	-0.1
2,625,659	-		PGA1_c25200	0.44	+0.9
2,625,701	+		PGA1_c25200	0.52	+0.1
2,625,731	-		PGA1_c25200	0.58	-1.5
2,625,809	-		PGA1_c25200	0.73	-0.1
2,625,868	-		PGA1_c25200	0.84	+0.0
2,625,875	-		PGA1_c25200	0.85	-1.2
2,625,875	-		PGA1_c25200	0.85	+1.3
2,626,031	-				+0.7
2,626,069	-				-0.0
2,626,071	+				-0.3
2,626,071	+				+0.9
2,626,121	+		PGA1_c25210	0.10	-2.5
2,626,148	-		PGA1_c25210	0.13	-2.2
2,626,154	+		PGA1_c25210	0.14	-0.1
2,626,162	+		PGA1_c25210	0.14	+0.6
2,626,170	-		PGA1_c25210	0.15	+0.3
2,626,172	+		PGA1_c25210	0.15	-0.8
2,626,172	+		PGA1_c25210	0.15	-0.9
2,626,272	-		PGA1_c25210	0.25	-0.5
2,626,311	+		PGA1_c25210	0.29	-0.2
2,626,319	+		PGA1_c25210	0.30	-2.9
2,626,395	+		PGA1_c25210	0.38	-0.2
2,626,403	-		PGA1_c25210	0.38	-0.9
2,626,498	+		PGA1_c25210	0.48	+0.8
2,626,516	-		PGA1_c25210	0.50	-1.0
2,626,622	-		PGA1_c25210	0.60	-0.3
2,626,646	+		PGA1_c25210	0.62	+0.2
2,626,688	+		PGA1_c25210	0.67	-1.4
2,626,730	+		PGA1_c25210	0.71	-1.4
2,626,730	+		PGA1_c25210	0.71	-0.4
2,626,738	-		PGA1_c25210	0.72	-0.1
2,626,788	+		PGA1_c25210	0.77	+0.2
2,626,876	+		PGA1_c25210	0.85	-1.0
2,626,884	-		PGA1_c25210	0.86	-0.7
2,627,078	-				-2.2
2,627,091	-				+0.2
2,627,099	+				-1.3
2,627,105	-				-0.7
2,627,115	-		PGA1_c25220	0.11	+0.7
2,627,128	+		PGA1_c25220	0.13	-0.7
2,627,196	-		PGA1_c25220	0.20	+1.2
2,627,196	-		PGA1_c25220	0.20	-0.3
2,627,405	-		PGA1_c25220	0.45	-1.1
2,627,405	-		PGA1_c25220	0.45	-1.5
2,627,419	+		PGA1_c25220	0.46	+0.1
2,627,470	-		PGA1_c25220	0.52	-1.2
2,627,499	-		PGA1_c25220	0.56	+1.4
2,627,499	-		PGA1_c25220	0.56	-0.6
2,627,505	+		PGA1_c25220	0.56	+0.1
2,627,536	+		PGA1_c25220	0.60	-0.8
2,627,537	-		PGA1_c25220	0.60	-1.1
2,627,538	+		PGA1_c25220	0.60	-0.9
2,627,913	+				+0.6
2,627,913	+				+0.3
2,627,913	+				-1.1
2,627,921	-				-3.3
2,627,926	-				+0.0