Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22580

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
2,340,569	+		PGA1_c22570	0.55	+1.2
2,340,591	+		PGA1_c22570	0.56	-1.3
2,340,591	+		PGA1_c22570	0.56	+0.0
2,340,592	-		PGA1_c22570	0.56	-3.4
2,340,592	-		PGA1_c22570	0.56	-0.9
2,340,592	-		PGA1_c22570	0.56	-2.5
2,340,592	-		PGA1_c22570	0.56	+0.0
2,340,596	+		PGA1_c22570	0.56	+1.6
2,340,599	-		PGA1_c22570	0.57	+0.8
2,340,726	+		PGA1_c22570	0.64	-1.2
2,340,736	-		PGA1_c22570	0.65	-0.9
2,340,766	+		PGA1_c22570	0.66	-0.6
2,340,774	-		PGA1_c22570	0.67	-0.9
2,340,774	-		PGA1_c22570	0.67	+0.4
2,340,776	+		PGA1_c22570	0.67	-1.5
2,340,776	+		PGA1_c22570	0.67	-2.9
2,340,776	+		PGA1_c22570	0.67	+0.7
2,340,776	+		PGA1_c22570	0.67	-0.0
2,340,806	-		PGA1_c22570	0.69	+0.1
2,340,855	+		PGA1_c22570	0.72	-0.7
2,340,879	-		PGA1_c22570	0.73	-0.0
2,340,964	-		PGA1_c22570	0.78	-0.1
2,340,983	-		PGA1_c22570	0.79	-1.4
2,341,008	-		PGA1_c22570	0.81	-0.4
2,341,013	-		PGA1_c22570	0.81	-2.5
2,341,049	-		PGA1_c22570	0.83	+0.5
2,341,049	-		PGA1_c22570	0.83	+0.8
2,341,051	+		PGA1_c22570	0.83	+0.3
2,341,051	+		PGA1_c22570	0.83	-0.6
2,341,051	+		PGA1_c22570	0.83	+0.2
2,341,051	+		PGA1_c22570	0.83	-1.8
2,341,051	+		PGA1_c22570	0.83	-1.2
2,341,051	+		PGA1_c22570	0.83	-0.2
2,341,051	+		PGA1_c22570	0.83	-0.9
2,341,051	+		PGA1_c22570	0.83	+0.5
2,341,051	+		PGA1_c22570	0.83	+0.8
2,341,051	+		PGA1_c22570	0.83	-1.5
2,341,051	+		PGA1_c22570	0.83	+0.1
2,341,051	+		PGA1_c22570	0.83	+0.3
2,341,051	+		PGA1_c22570	0.83	-0.2
2,341,051	+		PGA1_c22570	0.83	-0.0
2,341,051	+		PGA1_c22570	0.83	+0.5
2,341,051	+		PGA1_c22570	0.83	-1.1
2,341,051	+		PGA1_c22570	0.83	-1.7
2,341,051	+		PGA1_c22570	0.83	+0.3
2,341,051	+		PGA1_c22570	0.83	-1.1
2,341,051	+		PGA1_c22570	0.83	-0.6
2,341,051	+		PGA1_c22570	0.83	+1.2
2,341,056	+		PGA1_c22570	0.83	-1.3
2,341,059	-		PGA1_c22570	0.83	-1.6
2,341,059	-		PGA1_c22570	0.83	-0.1
2,341,059	-		PGA1_c22570	0.83	-1.2
2,341,059	-		PGA1_c22570	0.83	-0.9
2,341,059	-		PGA1_c22570	0.83	-0.9
2,341,059	-		PGA1_c22570	0.83	-0.4
2,341,059	-		PGA1_c22570	0.83	+1.2
2,341,059	-		PGA1_c22570	0.83	-1.8
2,341,059	-		PGA1_c22570	0.83	-0.5
2,341,059	-		PGA1_c22570	0.83	+0.8
2,341,059	-		PGA1_c22570	0.83	-0.5
2,341,059	-		PGA1_c22570	0.83	-0.2
2,341,059	-		PGA1_c22570	0.83	-0.3
2,341,064	-		PGA1_c22570	0.84	-1.2
2,341,224	+				+0.2
2,341,255	+				-0.0
2,341,400	-				+0.1
2,341,416	+				+0.2
2,341,416	+				-0.8
2,341,416	+				+0.4
2,341,416	+				-0.7
2,341,416	+				+0.5
2,341,416	+				+0.8
2,341,416	+				+0.3
2,341,424	-				+0.8
2,341,424	-				+0.3
2,341,424	-				+0.5
2,341,424	-				-0.1
2,341,424	-				-0.9
2,341,424	-				+2.1
2,341,424	-				-1.4
2,341,424	-				-1.2
2,341,424	-				-0.9
2,341,466	-				-0.6
2,341,466	-				+0.4
2,341,474	+				+0.2
2,341,482	-				+0.8
2,341,512	-				-0.3
2,341,535	+				-0.2
2,341,539	-				-1.1
2,341,543	-				-0.5
2,341,577	+				-0.3
2,341,577	+				-1.8
2,341,577	+				+1.0
2,341,585	-				-0.7
2,341,589	+				-2.4
2,341,589	+				-2.4
2,341,597	-				-1.6
2,341,610	+				+0.4
2,341,610	+				-0.8
2,341,633	-				-0.2
2,341,689	+		PGA1_c22580	0.12	-0.9
2,341,698	+		PGA1_c22580	0.13	-0.1
2,341,700	-		PGA1_c22580	0.13	+0.5
2,341,705	-		PGA1_c22580	0.14	-0.6
2,341,751	-		PGA1_c22580	0.17	-1.2
2,341,779	-		PGA1_c22580	0.20	-1.1
2,341,779	-		PGA1_c22580	0.20	-1.1
2,341,779	-		PGA1_c22580	0.20	+0.4
2,341,818	+		PGA1_c22580	0.23	-0.1
2,341,823	+		PGA1_c22580	0.23	-0.3
2,341,826	-		PGA1_c22580	0.23	-1.4
2,341,826	-		PGA1_c22580	0.23	+0.2
2,341,836	+		PGA1_c22580	0.24	-0.2
2,341,890	-		PGA1_c22580	0.29	-2.0
2,341,932	+		PGA1_c22580	0.32	+0.8
2,341,940	-		PGA1_c22580	0.33	-0.3
2,341,940	-		PGA1_c22580	0.33	+0.5
2,341,942	+		PGA1_c22580	0.33	+0.1
2,341,969	+		PGA1_c22580	0.35	-2.1
2,341,996	-		PGA1_c22580	0.37	-0.4
2,342,059	+		PGA1_c22580	0.42	-0.8
2,342,065	+		PGA1_c22580	0.43	+0.1
2,342,067	-		PGA1_c22580	0.43	-0.2
2,342,068	-		PGA1_c22580	0.43	-0.9
2,342,068	-		PGA1_c22580	0.43	-1.0
2,342,171	-		PGA1_c22580	0.51	-0.1
2,342,179	+		PGA1_c22580	0.52	-0.3
2,342,186	+		PGA1_c22580	0.52	+0.7
2,342,219	+		PGA1_c22580	0.55	-0.2
2,342,239	+		PGA1_c22580	0.57	+0.5
2,342,239	+		PGA1_c22580	0.57	+0.2
2,342,272	-		PGA1_c22580	0.59	-0.8
2,342,290	+		PGA1_c22580	0.61	-0.7
2,342,290	+		PGA1_c22580	0.61	-1.2
2,342,295	+		PGA1_c22580	0.61	+0.3
2,342,388	-		PGA1_c22580	0.69	-0.6
2,342,465	-		PGA1_c22580	0.75	+0.9
2,342,465	-		PGA1_c22580	0.75	-2.5
2,342,472	+		PGA1_c22580	0.75	-0.8
2,342,477	+		PGA1_c22580	0.76	-1.5
2,342,485	-		PGA1_c22580	0.76	-2.6
2,342,485	-		PGA1_c22580	0.76	+0.6
2,342,496	-		PGA1_c22580	0.77	+1.2
2,342,537	+		PGA1_c22580	0.80	+0.2
2,342,589	+		PGA1_c22580	0.85	+0.0
2,342,589	+		PGA1_c22580	0.85	+0.4
2,342,597	-		PGA1_c22580	0.85	-0.9
2,342,674	-				-1.8
2,342,738	+				+0.3
2,342,765	+				-0.9
2,343,026	-				+1.6
2,343,028	+				-0.7
2,343,028	+				-0.2
2,343,036	-				-0.2
2,343,036	-				-0.3
2,343,036	-				+0.5
2,343,036	-				-3.0
2,343,075	-				+0.1
2,343,085	+				-1.0
2,343,088	-				-1.8
2,343,093	-				+0.2
2,343,093	-				-1.0
2,343,125	+				+1.2
2,343,125	+				-1.7
2,343,252	+		PGA1_c22600	0.27	-0.2
2,343,260	-		PGA1_c22600	0.28	+0.0
2,343,260	-		PGA1_c22600	0.28	+0.3
2,343,312	+		PGA1_c22600	0.38	+0.0
2,343,326	-		PGA1_c22600	0.40	+0.7
2,343,415	-		PGA1_c22600	0.57	+0.0
2,343,427	+		PGA1_c22600	0.59	+0.7
2,343,427	+		PGA1_c22600	0.59	+0.7
2,343,427	+		PGA1_c22600	0.59	-0.9
2,343,427	+		PGA1_c22600	0.59	+1.2
2,343,427	+		PGA1_c22600	0.59	-0.4
2,343,427	+		PGA1_c22600	0.59	-1.7
2,343,435	-		PGA1_c22600	0.60	+0.5
2,343,435	-		PGA1_c22600	0.60	-0.7
2,343,435	-		PGA1_c22600	0.60	+0.9
2,343,435	-		PGA1_c22600	0.60	-0.6
2,343,437	+		PGA1_c22600	0.61	+0.2
2,343,451	+		PGA1_c22600	0.63	-1.4
2,343,461	+		PGA1_c22600	0.65	-0.1
2,343,461	+		PGA1_c22600	0.65	-0.4
2,343,463	+		PGA1_c22600	0.65	-1.2
2,343,515	-		PGA1_c22600	0.75	+0.4
2,343,540	-		PGA1_c22600	0.79	+0.0
2,343,622	+				-0.8
2,343,734	+				-1.2
2,343,742	-				-1.6