Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22430

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
2,325,930	-		PGA1_c22410	0.78	-0.2
2,325,950	-		PGA1_c22410	0.80	+0.5
2,325,950	-		PGA1_c22410	0.80	-0.2
2,326,015	-		PGA1_c22410	0.85	+0.1
2,326,026	-		PGA1_c22410	0.86	+1.7
2,326,031	-		PGA1_c22410	0.86	-0.9
2,326,080	+				-0.8
2,326,080	+				+0.3
2,326,086	+				+0.7
2,326,091	+				+0.4
2,326,094	-				+0.6
2,326,099	-				-1.2
2,326,099	-				-1.0
2,326,099	-				+0.1
2,326,202	+				-1.6
2,326,210	-				-1.4
2,326,210	-				+2.2
2,326,216	-				-0.1
2,326,239	+				+1.5
2,326,247	-				+0.4
2,326,289	-				-0.4
2,326,299	+		PGA1_c22420	0.10	+1.3
2,326,300	-		PGA1_c22420	0.10	-1.1
2,326,300	-		PGA1_c22420	0.10	+0.2
2,326,307	-		PGA1_c22420	0.11	-1.0
2,326,352	+		PGA1_c22420	0.18	-0.0
2,326,353	-		PGA1_c22420	0.18	-0.4
2,326,354	+		PGA1_c22420	0.18	+1.4
2,326,365	+		PGA1_c22420	0.20	-0.6
2,326,398	+		PGA1_c22420	0.25	-1.1
2,326,398	+		PGA1_c22420	0.25	-0.5
2,326,398	+		PGA1_c22420	0.25	-0.4
2,326,406	-		PGA1_c22420	0.26	-0.4
2,326,406	-		PGA1_c22420	0.26	-0.1
2,326,455	+		PGA1_c22420	0.34	+0.1
2,326,503	-		PGA1_c22420	0.41	+1.0
2,326,503	-		PGA1_c22420	0.41	-1.1
2,326,542	+		PGA1_c22420	0.47	-0.9
2,326,592	-		PGA1_c22420	0.54	-0.2
2,326,611	-		PGA1_c22420	0.57	+1.1
2,326,611	-		PGA1_c22420	0.57	-0.2
2,326,659	-		PGA1_c22420	0.64	-0.2
2,326,734	-		PGA1_c22420	0.76	+0.5
2,326,735	+		PGA1_c22420	0.76	-2.1
2,326,806	+		PGA1_c22420	0.87	+0.6
2,326,814	-		PGA1_c22420	0.88	-0.6
2,326,814	-		PGA1_c22420	0.88	-2.1
2,326,816	+		PGA1_c22420	0.88	+0.6
2,326,816	+		PGA1_c22420	0.88	-1.3
2,326,821	+		PGA1_c22420	0.89	-2.5
2,326,824	-		PGA1_c22420	0.89	-0.7
2,326,824	-		PGA1_c22420	0.89	-0.0
2,326,824	-		PGA1_c22420	0.89	-1.5
2,326,824	-		PGA1_c22420	0.89	-1.0
2,326,826	+		PGA1_c22420	0.90	-0.7
2,326,826	+		PGA1_c22420	0.90	-0.5
2,326,831	+				-2.0
2,326,831	+				-0.8
2,326,831	+				-2.5
2,326,839	-				-0.4
2,326,840	+				+0.3
2,326,849	-				+1.0
2,326,869	-				-0.8
2,326,876	-				+1.6
2,326,917	+				-2.2
2,326,919	+				+0.9
2,326,955	+				-0.7
2,326,962	-				+1.3
2,326,973	-				+0.3
2,327,010	-				-0.7
2,327,051	-		PGA1_c22430	0.13	-0.3
2,327,052	-		PGA1_c22430	0.13	-1.1
2,327,052	-		PGA1_c22430	0.13	-2.9
2,327,057	+		PGA1_c22430	0.13	+0.2
2,327,107	+		PGA1_c22430	0.18	-1.5
2,327,185	+		PGA1_c22430	0.24	-0.7
2,327,199	+		PGA1_c22430	0.25	-0.9
2,327,207	-		PGA1_c22430	0.26	-0.4
2,327,207	-		PGA1_c22430	0.26	-1.2
2,327,207	-		PGA1_c22430	0.26	-0.3
2,327,207	-		PGA1_c22430	0.26	-0.5
2,327,338	-		PGA1_c22430	0.37	-1.1
2,327,365	+		PGA1_c22430	0.39	-0.9
2,327,381	-		PGA1_c22430	0.40	+0.6
2,327,418	+		PGA1_c22430	0.43	-0.4
2,327,420	+		PGA1_c22430	0.43	+0.6
2,327,420	+		PGA1_c22430	0.43	+0.0
2,327,433	+		PGA1_c22430	0.44	+0.1
2,327,433	+		PGA1_c22430	0.44	-1.3
2,327,433	+		PGA1_c22430	0.44	-0.2
2,327,433	+		PGA1_c22430	0.44	-0.6
2,327,433	+		PGA1_c22430	0.44	-0.3
2,327,433	+		PGA1_c22430	0.44	-0.9
2,327,433	+		PGA1_c22430	0.44	+0.5
2,327,441	-		PGA1_c22430	0.45	-0.8
2,327,441	-		PGA1_c22430	0.45	+0.2
2,327,441	-		PGA1_c22430	0.45	-0.5
2,327,441	-		PGA1_c22430	0.45	-1.0
2,327,441	-		PGA1_c22430	0.45	+0.3
2,327,466	+		PGA1_c22430	0.47	-0.2
2,327,466	+		PGA1_c22430	0.47	-3.4
2,327,471	+		PGA1_c22430	0.48	-0.8
2,327,474	-		PGA1_c22430	0.48	-2.0
2,327,474	-		PGA1_c22430	0.48	-0.2
2,327,474	-		PGA1_c22430	0.48	-1.3
2,327,474	-		PGA1_c22430	0.48	-0.1
2,327,474	-		PGA1_c22430	0.48	-0.4
2,327,566	-		PGA1_c22430	0.55	-0.8
2,327,571	-		PGA1_c22430	0.56	+0.4
2,327,591	-		PGA1_c22430	0.58	+0.1
2,327,632	-		PGA1_c22430	0.61	-0.4
2,327,643	-		PGA1_c22430	0.62	+0.7
2,327,670	+		PGA1_c22430	0.64	+1.1
2,327,694	+		PGA1_c22430	0.66	-0.4
2,327,708	+		PGA1_c22430	0.67	-1.5
2,327,713	-		PGA1_c22430	0.68	+1.0
2,327,717	-		PGA1_c22430	0.68	-0.6
2,327,717	-		PGA1_c22430	0.68	+0.1
2,327,808	-		PGA1_c22430	0.75	-2.8
2,327,810	+		PGA1_c22430	0.76	-1.1
2,327,810	+		PGA1_c22430	0.76	-0.5
2,327,810	+		PGA1_c22430	0.76	-0.8
2,327,880	+		PGA1_c22430	0.81	-1.3
2,327,908	-		PGA1_c22430	0.84	-0.5
2,327,923	-		PGA1_c22430	0.85	+0.3
2,327,945	-		PGA1_c22430	0.87	+0.9
2,327,955	-		PGA1_c22430	0.88	-0.3
2,327,955	-		PGA1_c22430	0.88	+1.0
2,327,955	-		PGA1_c22430	0.88	+0.6
2,327,955	-		PGA1_c22430	0.88	-2.7
2,327,955	-		PGA1_c22430	0.88	-0.3
2,327,955	-		PGA1_c22430	0.88	+0.2
2,327,955	-		PGA1_c22430	0.88	+0.8
2,328,025	+				+0.7
2,328,025	-				+1.0
2,328,038	-				-0.2
2,328,069	+				-0.1
2,328,069	+				+1.4
2,328,069	+				+0.7
2,328,069	+				-1.7
2,328,072	+				-1.6
2,328,072	+				+0.3
2,328,072	+				-1.0
2,328,072	+				-1.7
2,328,077	-				-0.3
2,328,077	-				-0.8
2,328,080	-				-0.7
2,328,080	-				-0.4
2,328,082	-				+0.7
2,328,111	+				+0.3
2,328,112	+				+1.3
2,328,120	-				-0.0
2,328,120	-				-0.2
2,328,120	-				-3.0
2,328,167	-				-2.4
2,328,199	-				-0.1
2,328,240	+				-0.3
2,328,249	+				-0.4
2,328,253	-				-1.1
2,328,283	+		PGA1_c22440	0.10	-0.5
2,328,300	+		PGA1_c22440	0.11	-0.4
2,328,305	+		PGA1_c22440	0.12	-1.0
2,328,338	+		PGA1_c22440	0.13	-1.2
2,328,346	-		PGA1_c22440	0.14	+0.6
2,328,367	+		PGA1_c22440	0.15	-0.2
2,328,371	+		PGA1_c22440	0.15	+0.8
2,328,401	-		PGA1_c22440	0.17	+0.7
2,328,409	-		PGA1_c22440	0.17	-0.4
2,328,421	-		PGA1_c22440	0.18	-0.1
2,328,446	-		PGA1_c22440	0.20	+0.7
2,328,467	-		PGA1_c22440	0.21	+0.1
2,328,494	+		PGA1_c22440	0.22	-1.1
2,328,502	-		PGA1_c22440	0.23	+0.6
2,328,502	-		PGA1_c22440	0.23	-2.1
2,328,505	+		PGA1_c22440	0.23	+0.1
2,328,507	-		PGA1_c22440	0.23	-1.3
2,328,513	-		PGA1_c22440	0.23	-0.9
2,328,513	-		PGA1_c22440	0.23	-1.2
2,328,513	-		PGA1_c22440	0.23	+0.1
2,328,513	-		PGA1_c22440	0.23	+0.3
2,328,586	+		PGA1_c22440	0.27	+0.4
2,328,586	+		PGA1_c22440	0.27	-2.5
2,328,594	-		PGA1_c22440	0.28	-0.2
2,328,707	+		PGA1_c22440	0.34	+0.3
2,328,725	+		PGA1_c22440	0.35	+0.4
2,328,735	+		PGA1_c22440	0.36	-0.4
2,328,735	+		PGA1_c22440	0.36	-0.4
2,328,743	-		PGA1_c22440	0.36	+1.0
2,328,743	-		PGA1_c22440	0.36	+0.6
2,328,758	-		PGA1_c22440	0.37	-1.6
2,328,782	+		PGA1_c22440	0.39	-1.2
2,328,790	-		PGA1_c22440	0.39	-0.6
2,328,797	+		PGA1_c22440	0.39	+1.4
2,328,802	-		PGA1_c22440	0.40	+1.5
2,328,937	-		PGA1_c22440	0.47	+0.3
2,328,958	+		PGA1_c22440	0.49	+0.7
2,328,982	+		PGA1_c22440	0.50	-0.6
2,329,007	-		PGA1_c22440	0.51	+1.0
2,329,017	+		PGA1_c22440	0.52	-0.3
2,329,080	-		PGA1_c22440	0.55	-0.4
2,329,090	-		PGA1_c22440	0.56	+1.2
2,329,104	+		PGA1_c22440	0.57	+0.5
2,329,104	+		PGA1_c22440	0.57	-0.2