Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21110

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
2,186,653	+		PGA1_c21090	0.78	-0.5
2,186,653	+		PGA1_c21090	0.78	+1.4
2,186,706	-		PGA1_c21090	0.84	-0.4
2,186,714	+		PGA1_c21090	0.85	+2.4
2,186,789	+				-1.0
2,186,789	+				+1.4
2,186,789	+				+0.1
2,186,789	+				+0.2
2,186,811	+				+0.2
2,186,845	-				+2.4
2,186,859	+				+0.4
2,186,862	+				+0.5
2,186,862	+				+1.5
2,186,870	-				-1.2
2,186,870	-				+2.8
2,186,892	+				+0.8
2,186,892	+				-1.2
2,186,892	+				-1.0
2,186,892	+				-0.3
2,186,892	+				+0.8
2,186,900	-				+1.8
2,186,900	-				-0.2
2,186,915	-				+1.8
2,186,936	-		PGA1_c21100	0.12	+0.8
2,186,965	+		PGA1_c21100	0.15	+0.2
2,186,989	-		PGA1_c21100	0.18	+1.8
2,187,120	-		PGA1_c21100	0.34	+1.8
2,187,169	+		PGA1_c21100	0.40	+1.0
2,187,186	+		PGA1_c21100	0.42	+1.5
2,187,243	-		PGA1_c21100	0.49	-1.0
2,187,259	+		PGA1_c21100	0.51	-0.4
2,187,263	-		PGA1_c21100	0.52	-0.2
2,187,276	-		PGA1_c21100	0.53	+1.4
2,187,276	-		PGA1_c21100	0.53	+0.9
2,187,278	-		PGA1_c21100	0.54	+0.2
2,187,293	+		PGA1_c21100	0.55	-0.1
2,187,293	+		PGA1_c21100	0.55	-1.2
2,187,293	+		PGA1_c21100	0.55	-1.2
2,187,425	-		PGA1_c21100	0.72	-1.2
2,187,466	-		PGA1_c21100	0.77	+3.6
2,187,489	+		PGA1_c21100	0.79	+0.8
2,187,636	+				+0.8
2,187,712	+		PGA1_c21110	0.14	+2.1
2,187,925	-		PGA1_c21110	0.49	+1.2
2,187,927	+		PGA1_c21110	0.49	-1.8
2,187,927	+		PGA1_c21110	0.49	+1.4
2,187,932	+		PGA1_c21110	0.50	+0.4
2,187,935	-		PGA1_c21110	0.51	+0.8
2,187,935	-		PGA1_c21110	0.51	+0.8
2,187,935	-		PGA1_c21110	0.51	-0.0
2,187,940	-		PGA1_c21110	0.52	-0.2
2,187,955	-		PGA1_c21110	0.54	+1.1
2,187,956	-		PGA1_c21110	0.54	-0.2
2,187,992	+		PGA1_c21110	0.60	+1.1
2,187,992	+		PGA1_c21110	0.60	+0.8
2,187,993	+		PGA1_c21110	0.60	-2.2
2,188,049	+		PGA1_c21110	0.70	-0.2
2,188,057	-		PGA1_c21110	0.71	+1.1
2,188,091	-		PGA1_c21110	0.77	+0.8
2,188,091	-		PGA1_c21110	0.77	+1.4
2,188,105	+		PGA1_c21110	0.79	+3.4
2,188,110	+		PGA1_c21110	0.80	-0.8
2,188,140	-		PGA1_c21110	0.85	+1.0
2,188,184	-				+0.2
2,188,184	-				+1.1
2,188,250	+				+1.3
2,188,322	+				+0.8
2,188,322	+				+2.4
2,188,331	+				+1.1
2,188,339	-				-0.2
2,188,339	-				+1.4
2,188,445	+		PGA1_c21120	0.16	+1.4
2,188,521	+		PGA1_c21120	0.26	-1.5
2,188,571	-		PGA1_c21120	0.33	+1.8
2,188,572	+		PGA1_c21120	0.33	-0.0
2,188,598	+		PGA1_c21120	0.37	+1.8
2,188,603	+		PGA1_c21120	0.38	-0.4
2,188,606	-		PGA1_c21120	0.38	-0.2
2,188,613	-		PGA1_c21120	0.39	+1.8
2,188,710	+		PGA1_c21120	0.53	-1.5
2,188,740	+		PGA1_c21120	0.57	+2.1
2,188,790	+		PGA1_c21120	0.64	-1.8
2,188,798	-		PGA1_c21120	0.65	+0.3
2,188,802	+		PGA1_c21120	0.66	-1.4
2,188,805	-		PGA1_c21120	0.66	+2.7
2,188,850	-		PGA1_c21120	0.73	-0.2
2,188,873	-		PGA1_c21120	0.76	+0.1
2,188,979	+				+2.8
2,189,080	-		PGA1_c21130	0.15	+0.1
2,189,091	-		PGA1_c21130	0.18	-0.4
2,189,098	+		PGA1_c21130	0.21	-0.4
2,189,106	-		PGA1_c21130	0.23	-1.8
2,189,112	+		PGA1_c21130	0.26	+1.8
2,189,112	+		PGA1_c21130	0.26	+0.8
2,189,112	+		PGA1_c21130	0.26	+0.8
2,189,120	-		PGA1_c21130	0.28	+1.0
2,189,147	+		PGA1_c21130	0.37	+0.5
2,189,182	+		PGA1_c21130	0.49	-0.6
2,189,200	-		PGA1_c21130	0.55	+1.4
2,189,229	+		PGA1_c21130	0.65	+1.8