Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20980

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
2,175,201	+				-1.0
2,175,241	-				-1.2
2,175,279	-		PGA1_c20970	0.13	+2.4
2,175,279	-		PGA1_c20970	0.13	-0.8
2,175,279	-		PGA1_c20970	0.13	+0.8
2,175,368	-		PGA1_c20970	0.25	+0.5
2,175,393	-		PGA1_c20970	0.28	+0.7
2,175,397	-		PGA1_c20970	0.29	+1.1
2,175,415	-		PGA1_c20970	0.31	+0.3
2,175,425	-		PGA1_c20970	0.32	+1.0
2,175,451	+		PGA1_c20970	0.36	-1.8
2,175,459	-		PGA1_c20970	0.37	-0.2
2,175,459	-		PGA1_c20970	0.37	+0.9
2,175,461	+		PGA1_c20970	0.37	+1.3
2,175,469	-		PGA1_c20970	0.38	+1.3
2,175,598	+		PGA1_c20970	0.54	-2.0
2,175,604	-		PGA1_c20970	0.55	+0.8
2,175,710	+		PGA1_c20970	0.69	+0.5
2,175,749	-		PGA1_c20970	0.74	+0.4
2,175,830	+		PGA1_c20970	0.84	+0.8
2,175,883	-				-0.8
2,175,894	+				+2.2
2,175,902	-				-1.1
2,175,920	+				-0.2
2,175,920	+				+1.6
2,175,954	+				+1.7
2,175,959	+				+0.8
2,175,962	-				+2.1
2,176,014	+				+0.5
2,176,037	+				+1.1
2,176,042	+				-0.8
2,176,048	+				-1.5
2,176,051	-				-1.9
2,176,051	-				+0.2
2,176,133	-				+0.4
2,176,146	+				-2.4
2,176,153	-				+0.9
2,176,154	-				+0.8
2,176,162	+				-0.8
2,176,164	+				+2.4
2,176,201	+				+0.8
2,176,202	-				-0.4
2,176,202	-				-0.2
2,176,202	-				-0.5
2,176,209	-				-1.5
2,176,258	+				-0.2
2,176,259	+				+0.8
2,176,260	+				-1.0
2,176,266	-				-0.2
2,176,288	-				+0.6
2,176,339	+		PGA1_c20980	0.14	+0.8
2,176,339	+		PGA1_c20980	0.14	+2.4
2,176,339	+		PGA1_c20980	0.14	+2.4
2,176,339	+		PGA1_c20980	0.14	-1.2
2,176,347	-		PGA1_c20980	0.15	+1.8
2,176,352	-		PGA1_c20980	0.15	+1.2
2,176,354	+		PGA1_c20980	0.16	-0.8
2,176,362	-		PGA1_c20980	0.16	+0.7
2,176,391	+		PGA1_c20980	0.19	-1.2
2,176,443	-		PGA1_c20980	0.24	+0.6
2,176,449	+		PGA1_c20980	0.25	+1.2
2,176,460	+		PGA1_c20980	0.26	-0.0
2,176,468	-		PGA1_c20980	0.27	+1.3
2,176,490	+		PGA1_c20980	0.29	-2.7
2,176,549	+		PGA1_c20980	0.35	-0.8
2,176,549	+		PGA1_c20980	0.35	+0.2
2,176,591	+		PGA1_c20980	0.39	+2.5
2,176,591	+		PGA1_c20980	0.39	-1.5
2,176,591	+		PGA1_c20980	0.39	+0.8
2,176,591	+		PGA1_c20980	0.39	+0.8
2,176,591	+		PGA1_c20980	0.39	+0.4
2,176,591	+		PGA1_c20980	0.39	+0.5
2,176,591	+		PGA1_c20980	0.39	+0.5
2,176,591	+		PGA1_c20980	0.39	+0.8
2,176,591	+		PGA1_c20980	0.39	+1.1
2,176,599	-		PGA1_c20980	0.40	-1.5
2,176,599	-		PGA1_c20980	0.40	-1.2
2,176,599	-		PGA1_c20980	0.40	+2.8
2,176,606	-		PGA1_c20980	0.41	+0.1
2,176,613	-		PGA1_c20980	0.41	-1.2
2,176,615	+		PGA1_c20980	0.42	+0.5
2,176,615	+		PGA1_c20980	0.42	+1.4
2,176,615	+		PGA1_c20980	0.42	-1.8
2,176,615	+		PGA1_c20980	0.42	-0.0
2,176,615	+		PGA1_c20980	0.42	+0.8
2,176,615	+		PGA1_c20980	0.42	+0.1
2,176,615	+		PGA1_c20980	0.42	-2.2
2,176,615	+		PGA1_c20980	0.42	+2.2
2,176,615	+		PGA1_c20980	0.42	+0.8
2,176,623	-		PGA1_c20980	0.42	+2.5
2,176,623	-		PGA1_c20980	0.42	+0.5
2,176,623	-		PGA1_c20980	0.42	+0.4
2,176,633	+		PGA1_c20980	0.43	+0.8
2,176,642	-		PGA1_c20980	0.44	-0.2
2,176,658	-		PGA1_c20980	0.46	+0.4
2,176,678	+		PGA1_c20980	0.48	-0.1
2,176,686	-		PGA1_c20980	0.49	+1.4
2,176,698	-		PGA1_c20980	0.50	-0.5
2,176,703	-		PGA1_c20980	0.50	+0.2
2,176,713	-		PGA1_c20980	0.51	+1.4
2,176,758	-		PGA1_c20980	0.56	+2.4
2,176,760	+		PGA1_c20980	0.56	+2.0
2,176,760	+		PGA1_c20980	0.56	-0.7
2,176,760	+		PGA1_c20980	0.56	+0.8
2,176,798	+		PGA1_c20980	0.60	+0.8
2,176,866	+		PGA1_c20980	0.67	-0.2
2,176,930	-		PGA1_c20980	0.73	-0.4
2,176,962	-		PGA1_c20980	0.76	+1.0
2,177,018	-		PGA1_c20980	0.82	+0.0
2,177,028	-		PGA1_c20980	0.83	-0.8
2,177,082	+		PGA1_c20980	0.88	+0.8
2,177,082	+		PGA1_c20980	0.88	-0.2
2,177,084	+		PGA1_c20980	0.88	+0.1
2,177,090	-		PGA1_c20980	0.89	-0.2
2,177,092	+		PGA1_c20980	0.89	-0.8
2,177,116	+				+0.8
2,177,124	-				+0.8
2,177,158	+				+1.5
2,177,161	-				-0.8
2,177,163	+				+1.8
2,177,163	+				-0.2
2,177,163	+				+0.5
2,177,163	+				-1.6
2,177,163	+				-0.8
2,177,166	-				-0.8
2,177,166	-				-0.3
2,177,166	-				-0.1
2,177,171	-				-0.0
2,177,188	+				+0.4
2,177,196	-				+0.0
2,177,196	-				+1.8
2,177,268	+				-0.2
2,177,268	+				+1.0
2,177,269	-				-2.4
2,177,269	-				-2.4
2,177,276	-				-0.2