Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19960

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
2,069,833	+				-0.3
2,069,841	-				+0.1
2,069,841	-				+0.7
2,069,898	+				+2.3
2,070,050	-		PGA1_c19950	0.18	+0.7
2,070,080	+		PGA1_c19950	0.22	+1.7
2,070,088	-		PGA1_c19950	0.23	-1.3
2,070,092	+		PGA1_c19950	0.23	+0.4
2,070,172	-		PGA1_c19950	0.33	+0.6
2,070,177	+		PGA1_c19950	0.34	-1.6
2,070,182	+		PGA1_c19950	0.34	-1.5
2,070,197	+		PGA1_c19950	0.36	+2.3
2,070,313	-		PGA1_c19950	0.50	+0.7
2,070,362	+		PGA1_c19950	0.56	+0.7
2,070,394	+		PGA1_c19950	0.59	-0.3
2,070,395	+		PGA1_c19950	0.60	+1.7
2,070,403	-		PGA1_c19950	0.61	+0.9
2,070,403	-		PGA1_c19950	0.61	+1.0
2,070,405	+		PGA1_c19950	0.61	+0.5
2,070,405	+		PGA1_c19950	0.61	+1.4
2,070,464	-		PGA1_c19950	0.68	-0.3
2,070,473	+		PGA1_c19950	0.69	+0.0
2,070,481	-		PGA1_c19950	0.70	+1.1
2,070,491	-		PGA1_c19950	0.71	+0.7
2,070,508	+		PGA1_c19950	0.73	+1.0
2,070,680	+				-0.3
2,070,683	-				-0.0
2,070,687	+				+1.5
2,070,694	+				+1.3
2,070,694	+				+0.3
2,070,695	-				+0.4
2,070,702	-				-0.3
2,070,766	+				+1.7
2,071,010	-		PGA1_c19960	0.31	+1.1
2,071,043	-		PGA1_c19960	0.35	+0.5
2,071,064	+		PGA1_c19960	0.39	+1.6
2,071,155	+		PGA1_c19960	0.52	+0.9
2,071,181	+		PGA1_c19960	0.55	+0.7
2,071,181	+		PGA1_c19960	0.55	+0.7
2,071,182	-		PGA1_c19960	0.56	+0.7
2,071,182	-		PGA1_c19960	0.56	+1.7
2,071,238	+		PGA1_c19960	0.64	+0.4
2,071,238	+		PGA1_c19960	0.64	+1.3
2,071,238	+		PGA1_c19960	0.64	+1.4
2,071,246	-		PGA1_c19960	0.65	+1.7
2,071,246	-		PGA1_c19960	0.65	+0.7
2,071,246	-		PGA1_c19960	0.65	+1.0
2,071,246	-		PGA1_c19960	0.65	+0.7
2,071,385	+		PGA1_c19960	0.85	+0.7
2,071,618	-				-0.9
2,071,636	+				+1.1
2,071,636	+				-0.3
2,071,658	+				+1.7
2,071,668	+				+0.5
2,071,676	-				-0.9
2,071,684	-				-0.6
2,071,686	+				+1.1
2,071,686	+				+1.1
2,071,689	-				+1.3
2,071,694	-				-0.3
2,071,721	-				+0.9
2,071,750	+				+0.1
2,071,776	+		PGA1_c19970	0.10	+2.3
2,071,803	+		PGA1_c19970	0.13	-0.6
2,071,871	-		PGA1_c19970	0.20	+0.7
2,071,907	+		PGA1_c19970	0.23	+0.1
2,071,920	+		PGA1_c19970	0.25	+1.7
2,071,922	+		PGA1_c19970	0.25	-0.3
2,071,928	-		PGA1_c19970	0.26	+2.1
2,071,945	-		PGA1_c19970	0.27	-1.6
2,071,977	+		PGA1_c19970	0.30	+1.7
2,072,027	-		PGA1_c19970	0.35	-0.3
2,072,138	-		PGA1_c19970	0.47	-0.1
2,072,153	-		PGA1_c19970	0.48	+0.7
2,072,155	+		PGA1_c19970	0.48	-1.9
2,072,189	+		PGA1_c19970	0.52	+0.9
2,072,222	+		PGA1_c19970	0.55	+2.3
2,072,222	+		PGA1_c19970	0.55	-0.3
2,072,222	+		PGA1_c19970	0.55	-0.1
2,072,222	+		PGA1_c19970	0.55	-1.6
2,072,230	-		PGA1_c19970	0.56	-1.6
2,072,230	-		PGA1_c19970	0.56	+2.3
2,072,291	+		PGA1_c19970	0.62	+1.0
2,072,309	+		PGA1_c19970	0.64	+1.7
2,072,408	-		PGA1_c19970	0.74	+1.0