Strain Fitness in Marinobacter adhaerens HP15 around HP15_1837
Experiment: m.b. Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Vancomycin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,935,841 | + | HP15_1835 | 0.67 | +0.1 | |
1,935,892 | - | HP15_1835 | 0.72 | -0.2 | |
1,935,979 | + | HP15_1835 | 0.81 | +0.1 | |
1,935,989 | + | HP15_1835 | 0.83 | -0.4 | |
1,935,997 | - | HP15_1835 | 0.83 | -0.2 | |
1,935,997 | - | HP15_1835 | 0.83 | +0.4 | |
1,935,997 | - | HP15_1835 | 0.83 | -0.2 | |
1,936,100 | + | -0.1 | |||
1,936,126 | + | -0.7 | |||
1,936,167 | + | -0.5 | |||
1,936,173 | + | -0.1 | |||
1,936,255 | + | HP15_1836 | 0.18 | -0.5 | |
1,936,255 | + | HP15_1836 | 0.18 | -0.3 | |
1,936,263 | - | HP15_1836 | 0.19 | +0.0 | |
1,936,329 | + | HP15_1836 | 0.32 | -0.1 | |
1,936,340 | + | HP15_1836 | 0.34 | -0.3 | |
1,936,380 | + | HP15_1836 | 0.41 | -0.2 | |
1,936,627 | - | HP15_1836 | 0.87 | +0.9 | |
1,936,908 | - | HP15_1837 | 0.34 | -1.4 | |
1,937,102 | - | HP15_1837 | 0.65 | -0.5 | |
1,937,132 | + | HP15_1837 | 0.70 | -0.8 |
Or see this region's nucleotide sequence