Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18640

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
1,935,709	+				-1.7
1,935,709	+				-0.6
1,935,717	-		PGA1_c18620	0.10	+0.0
1,935,717	-		PGA1_c18620	0.10	+0.8
1,935,717	-		PGA1_c18620	0.10	+0.6
1,935,717	-		PGA1_c18620	0.10	-0.4
1,935,717	-		PGA1_c18620	0.10	+1.6
1,935,728	+		PGA1_c18620	0.15	+1.9
1,935,743	-		PGA1_c18620	0.21	+0.7
1,935,753	-		PGA1_c18620	0.25	+0.2
1,935,778	-		PGA1_c18620	0.35	+0.2
1,935,778	-		PGA1_c18620	0.35	+0.8
1,935,802	+		PGA1_c18620	0.45	+1.2
1,935,802	+		PGA1_c18620	0.45	-1.0
1,935,810	-		PGA1_c18620	0.49	+1.4
1,935,817	-		PGA1_c18620	0.51	-1.2
1,935,962	-				-1.3
1,936,002	+				+0.6
1,936,006	+				+0.0
1,936,042	+				-1.0
1,936,109	+				+1.2
1,936,109	+				-1.4
1,936,109	+				+1.5
1,936,109	+				+1.8
1,936,117	-				-0.6
1,936,117	-				-0.1
1,936,117	-				-0.4
1,936,117	-				+2.8
1,936,117	-				-0.3
1,936,127	-				+1.0
1,936,152	-				+0.4
1,936,168	-				-0.5
1,936,174	-				-1.5
1,936,237	+				+0.8
1,936,238	+				+0.6
1,936,297	+				+1.3
1,936,369	-				+1.0
1,936,410	-				-1.0
1,936,415	-				-0.2
1,936,420	+				+1.6
1,936,428	-				+1.6
1,936,449	+		PGA1_c18630	0.16	-0.4
1,936,449	+		PGA1_c18630	0.16	-1.0
1,936,474	-		PGA1_c18630	0.26	-2.4
1,936,476	+		PGA1_c18630	0.27	-1.5
1,936,558	-		PGA1_c18630	0.63	+2.2
1,936,580	+		PGA1_c18630	0.72	+0.4
1,936,659	+				-0.2
1,936,699	+				-2.2
1,936,742	+		PGA1_c18640	0.23	-0.7
1,936,743	+		PGA1_c18640	0.23	-1.1
1,936,743	+		PGA1_c18640	0.23	-0.5
1,936,802	-		PGA1_c18640	0.49	-0.4
1,936,844	+		PGA1_c18640	0.68	+0.5
1,936,844	+		PGA1_c18640	0.68	-3.7
1,936,846	-		PGA1_c18640	0.69	-0.8
1,936,852	-		PGA1_c18640	0.72	-1.2
1,936,954	+				-0.1
1,936,957	-				-0.4
1,936,957	-				-0.7
1,936,995	-				-0.8
1,937,166	+				-0.8
1,937,186	-				+2.6
1,937,198	+				-0.3
1,937,206	-				-1.3
1,937,213	+				+0.2
1,937,228	+				+0.4
1,937,242	-				-0.4
1,937,249	+				+0.4
1,937,268	+		PGA1_c18650	0.14	+0.6
1,937,268	+		PGA1_c18650	0.14	+0.5
1,937,268	+		PGA1_c18650	0.14	+0.6
1,937,268	+		PGA1_c18650	0.14	-1.5
1,937,331	-		PGA1_c18650	0.32	-1.8
1,937,367	+		PGA1_c18650	0.42	+1.0
1,937,429	+		PGA1_c18650	0.60	+0.6
1,937,429	+		PGA1_c18650	0.60	+1.6
1,937,429	+		PGA1_c18650	0.60	+2.4
1,937,429	+		PGA1_c18650	0.60	+1.0
1,937,430	-		PGA1_c18650	0.60	-0.4
1,937,431	+		PGA1_c18650	0.61	+0.5
1,937,437	-		PGA1_c18650	0.62	+1.0
1,937,446	+		PGA1_c18650	0.65	-1.0
1,937,605	+				+0.3
1,937,615	+		PGA1_c18660	0.11	-0.7
1,937,637	+		PGA1_c18660	0.19	-1.4
1,937,687	+		PGA1_c18660	0.36	+0.6
1,937,691	+		PGA1_c18660	0.37	-0.4
1,937,693	+		PGA1_c18660	0.38	-0.4
1,937,699	-		PGA1_c18660	0.40	+0.0
1,937,701	+		PGA1_c18660	0.41	+0.3
1,937,770	+		PGA1_c18660	0.64	-0.5
1,937,784	+		PGA1_c18660	0.69	+0.6
1,937,803	+		PGA1_c18660	0.76	-0.5
1,937,803	+		PGA1_c18660	0.76	+0.6
1,937,840	+		PGA1_c18660	0.88	+0.0
1,937,901	+				-1.2
1,937,901	+				+3.0