Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18040

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
1,884,896	+				-1.8
1,884,938	+				+0.2
1,884,962	+				-0.7
1,884,999	+				+1.1
1,884,999	-				+0.1
1,884,999	-				+0.6
1,885,016	+		PGA1_c18030	0.12	-1.8
1,885,030	+		PGA1_c18030	0.14	+1.1
1,885,038	-		PGA1_c18030	0.15	-1.3
1,885,051	+		PGA1_c18030	0.16	-0.3
1,885,056	+		PGA1_c18030	0.17	-0.9
1,885,059	-		PGA1_c18030	0.17	+0.8
1,885,061	+		PGA1_c18030	0.18	-1.4
1,885,061	+		PGA1_c18030	0.18	-0.9
1,885,071	+		PGA1_c18030	0.19	+1.6
1,885,071	+		PGA1_c18030	0.19	+0.6
1,885,079	-		PGA1_c18030	0.20	-1.0
1,885,079	-		PGA1_c18030	0.20	+0.1
1,885,079	-		PGA1_c18030	0.20	+0.9
1,885,091	-		PGA1_c18030	0.21	-1.1
1,885,093	-		PGA1_c18030	0.22	-0.5
1,885,098	-		PGA1_c18030	0.22	+0.3
1,885,136	-		PGA1_c18030	0.27	+0.9
1,885,136	-		PGA1_c18030	0.27	-0.8
1,885,146	-		PGA1_c18030	0.28	+0.4
1,885,197	+		PGA1_c18030	0.35	+0.3
1,885,232	-		PGA1_c18030	0.39	-0.1
1,885,243	+		PGA1_c18030	0.41	-0.2
1,885,243	+		PGA1_c18030	0.41	-2.0
1,885,243	+		PGA1_c18030	0.41	+0.6
1,885,243	+		PGA1_c18030	0.41	-0.0
1,885,251	-		PGA1_c18030	0.42	+0.1
1,885,251	-		PGA1_c18030	0.42	-1.8
1,885,251	-		PGA1_c18030	0.42	+0.3
1,885,251	-		PGA1_c18030	0.42	+0.6
1,885,251	-		PGA1_c18030	0.42	-1.2
1,885,251	-		PGA1_c18030	0.42	-1.8
1,885,269	-		PGA1_c18030	0.44	+0.2
1,885,290	+		PGA1_c18030	0.46	-0.6
1,885,325	-		PGA1_c18030	0.51	+1.4
1,885,380	-		PGA1_c18030	0.58	+0.6
1,885,424	+		PGA1_c18030	0.63	-1.3
1,885,429	+		PGA1_c18030	0.64	-0.0
1,885,429	+		PGA1_c18030	0.64	-0.4
1,885,429	+		PGA1_c18030	0.64	+2.1
1,885,434	+		PGA1_c18030	0.65	-0.7
1,885,437	-		PGA1_c18030	0.65	+0.6
1,885,574	+		PGA1_c18030	0.82	-1.9
1,885,574	+		PGA1_c18030	0.82	-0.9
1,885,574	+		PGA1_c18030	0.82	+1.6
1,885,574	+		PGA1_c18030	0.82	-1.0
1,885,574	+		PGA1_c18030	0.82	+0.1
1,885,582	-		PGA1_c18030	0.83	-0.1
1,885,587	+		PGA1_c18030	0.84	+0.7
1,885,633	-		PGA1_c18030	0.90	+0.7
1,885,675	+				-1.0
1,885,675	+				-0.0
1,885,683	-				+1.0
1,885,694	+				+0.0
1,885,710	+				-0.3
1,885,728	-				+0.3
1,885,875	-		PGA1_c18040	0.15	-0.6
1,885,885	-		PGA1_c18040	0.17	-1.3
1,885,969	+		PGA1_c18040	0.31	-0.6
1,885,977	-		PGA1_c18040	0.32	+0.8
1,886,016	+		PGA1_c18040	0.38	+0.4
1,886,023	+		PGA1_c18040	0.39	+0.1
1,886,024	-		PGA1_c18040	0.40	-0.9
1,886,024	-		PGA1_c18040	0.40	-0.7
1,886,028	+		PGA1_c18040	0.40	+0.6
1,886,031	-		PGA1_c18040	0.41	+0.1
1,886,049	+		PGA1_c18040	0.44	-1.1
1,886,054	+		PGA1_c18040	0.45	-0.8
1,886,054	+		PGA1_c18040	0.45	-0.4
1,886,062	-		PGA1_c18040	0.46	-0.3
1,886,088	+		PGA1_c18040	0.50	+2.4
1,886,195	+		PGA1_c18040	0.68	-0.7
1,886,236	+		PGA1_c18040	0.75	-0.9
1,886,244	-		PGA1_c18040	0.76	+0.1
1,886,250	-		PGA1_c18040	0.77	+1.6
1,886,277	+		PGA1_c18040	0.82	-0.7
1,886,277	+		PGA1_c18040	0.82	-1.9
1,886,285	+		PGA1_c18040	0.83	+1.1
1,886,298	-		PGA1_c18040	0.85	-0.8
1,886,298	-		PGA1_c18040	0.85	+0.7
1,886,324	-		PGA1_c18040	0.89	-0.2
1,886,376	+				+0.1
1,886,379	-				+1.0
1,886,416	-				-1.0
1,886,454	-				+0.7
1,886,511	+				-0.2
1,886,519	-				+0.9
1,886,519	-				-1.4
1,886,589	+				+2.4
1,886,597	-				-0.8
1,886,709	+		PGA1_c18050	0.15	+0.8
1,886,715	-		PGA1_c18050	0.16	-0.0
1,886,715	-		PGA1_c18050	0.16	+0.2
1,886,717	+		PGA1_c18050	0.16	-2.2
1,886,748	-		PGA1_c18050	0.22	+0.1
1,886,864	+		PGA1_c18050	0.42	+0.7
1,886,864	+		PGA1_c18050	0.42	-1.0
1,887,002	-		PGA1_c18050	0.66	+1.5
1,887,017	+		PGA1_c18050	0.69	+0.6
1,887,095	-		PGA1_c18050	0.82	-0.2
1,887,208	+				+0.5
1,887,208	+				-0.8
1,887,208	+				+0.3
1,887,208	+				+0.1
1,887,208	+				-1.0
1,887,208	+				+0.2
1,887,208	+				+1.4
1,887,208	+				+0.6
1,887,208	+				+1.3
1,887,216	-				-0.2
1,887,216	-				+0.5
1,887,216	-				-0.0
1,887,273	+				+0.6
1,887,273	+				-2.0
1,887,273	+				-0.2
1,887,281	+				+1.2
1,887,325	-				+1.3
1,887,325	-				+1.8
1,887,340	+				-0.6
1,887,342	+				-0.3
1,887,350	-				+0.2
1,887,350	-				+0.6
1,887,368	+				-0.4