Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12000

Experiment: m.b. methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.004 vol%
1,246,819	+		PGA1_c11990	0.51	+0.1
1,246,874	-		PGA1_c11990	0.54	-0.8
1,246,978	+		PGA1_c11990	0.61	-2.5
1,246,978	+		PGA1_c11990	0.61	-0.1
1,247,014	+		PGA1_c11990	0.63	+0.0
1,247,014	+		PGA1_c11990	0.63	+1.0
1,247,014	+		PGA1_c11990	0.63	+0.1
1,247,041	+		PGA1_c11990	0.65	-1.9
1,247,041	+		PGA1_c11990	0.65	+0.5
1,247,059	-		PGA1_c11990	0.66	+0.0
1,247,078	+		PGA1_c11990	0.67	-0.2
1,247,086	-		PGA1_c11990	0.67	-1.2
1,247,121	-		PGA1_c11990	0.70	+0.1
1,247,143	+		PGA1_c11990	0.71	-0.0
1,247,143	+		PGA1_c11990	0.71	+0.5
1,247,149	+		PGA1_c11990	0.71	+0.1
1,247,157	-		PGA1_c11990	0.72	-0.7
1,247,217	-		PGA1_c11990	0.76	+0.4
1,247,217	-		PGA1_c11990	0.76	+1.3
1,247,238	-		PGA1_c11990	0.77	+1.0
1,247,238	-		PGA1_c11990	0.77	+0.0
1,247,242	+		PGA1_c11990	0.77	-0.3
1,247,250	-		PGA1_c11990	0.78	-0.1
1,247,255	-		PGA1_c11990	0.78	-1.7
1,247,322	+		PGA1_c11990	0.82	-0.4
1,247,322	+		PGA1_c11990	0.82	+1.7
1,247,330	-		PGA1_c11990	0.82	-0.7
1,247,330	-		PGA1_c11990	0.82	-1.1
1,247,330	-		PGA1_c11990	0.82	+0.5
1,247,427	+		PGA1_c11990	0.88	-1.5
1,247,444	+		PGA1_c11990	0.89	-0.2
1,247,491	+				-1.3
1,247,504	-				+0.0
1,247,543	-				+0.2
1,247,583	+				-0.1
1,247,596	-				+0.7
1,247,793	-				-0.2
1,247,860	-		PGA1_c12000	0.11	+0.6
1,247,881	-		PGA1_c12000	0.14	-0.3
1,247,913	-		PGA1_c12000	0.19	+0.3
1,247,915	-		PGA1_c12000	0.19	+0.7
1,247,941	-		PGA1_c12000	0.23	-2.4
1,247,949	+		PGA1_c12000	0.24	-0.1
1,248,014	+		PGA1_c12000	0.34	-1.3
1,248,017	-		PGA1_c12000	0.35	-0.6
1,248,039	-		PGA1_c12000	0.38	-0.1
1,248,039	-		PGA1_c12000	0.38	-0.7
1,248,039	-		PGA1_c12000	0.38	+0.5
1,248,076	+		PGA1_c12000	0.43	-0.8
1,248,076	+		PGA1_c12000	0.43	-1.4
1,248,084	-		PGA1_c12000	0.45	+0.4
1,248,105	-		PGA1_c12000	0.48	-0.1
1,248,105	-		PGA1_c12000	0.48	+1.9
1,248,107	+		PGA1_c12000	0.48	+0.5
1,248,107	+		PGA1_c12000	0.48	+0.7
1,248,107	+		PGA1_c12000	0.48	-0.4
1,248,115	-		PGA1_c12000	0.49	-2.4
1,248,115	-		PGA1_c12000	0.49	+0.4
1,248,207	-		PGA1_c12000	0.63	+0.0
1,248,207	-		PGA1_c12000	0.63	-1.7
1,248,207	-		PGA1_c12000	0.63	+0.3
1,248,209	-		PGA1_c12000	0.63	+0.1
1,248,220	+		PGA1_c12000	0.65	+0.3
1,248,228	-		PGA1_c12000	0.66	-0.9
1,248,228	-		PGA1_c12000	0.66	-1.7
1,248,230	+		PGA1_c12000	0.67	-0.4
1,248,246	-		PGA1_c12000	0.69	-0.7
1,248,295	+		PGA1_c12000	0.76	-0.7
1,248,354	+		PGA1_c12000	0.85	-1.7
1,248,376	+		PGA1_c12000	0.88	+0.9
1,248,384	+		PGA1_c12000	0.90	+0.9
1,248,384	+		PGA1_c12000	0.90	-1.5
1,248,384	+		PGA1_c12000	0.90	-0.1
1,248,384	+		PGA1_c12000	0.90	+1.0
1,248,394	+				-1.8
1,248,397	+				+0.2
1,248,402	-				-0.1
1,248,402	-				-0.5
1,248,402	-				-0.7
1,248,403	+				-1.5
1,248,403	+				-0.7
1,248,457	-				-1.0
1,248,502	+				-0.1
1,248,510	-				-1.6
1,248,593	-				+0.4
1,248,595	+				-0.1
1,248,685	+				-0.1
1,248,708	-		PGA1_c12010	0.13	+1.0
1,248,757	+		PGA1_c12010	0.20	-0.9
1,248,815	+		PGA1_c12010	0.29	-0.1
1,248,823	-		PGA1_c12010	0.30	+1.0
1,248,831	+		PGA1_c12010	0.31	-0.9
1,248,831	+		PGA1_c12010	0.31	-0.5
1,248,839	-		PGA1_c12010	0.32	+0.3
1,248,849	-		PGA1_c12010	0.34	+1.9
1,248,903	+		PGA1_c12010	0.41	+0.2
1,248,903	+		PGA1_c12010	0.41	-2.5
1,248,911	-		PGA1_c12010	0.43	-0.1
1,248,921	-		PGA1_c12010	0.44	-1.4
1,248,958	+		PGA1_c12010	0.49	-1.7
1,248,963	+		PGA1_c12010	0.50	-1.6
1,248,966	-		PGA1_c12010	0.51	-0.1
1,248,971	-		PGA1_c12010	0.51	+0.5
1,249,059	+		PGA1_c12010	0.64	+2.6
1,249,081	+		PGA1_c12010	0.67	-1.4
1,249,141	+		PGA1_c12010	0.76	+0.7
1,249,173	-		PGA1_c12010	0.81	+0.2
1,249,184	+		PGA1_c12010	0.82	-1.7
1,249,197	-		PGA1_c12010	0.84	-0.5
1,249,262	+				-1.1
1,249,270	-				+0.6
1,249,300	+				-0.5
1,249,300	+				-2.5
1,249,301	+				+1.1
1,249,301	+				+0.9
1,249,308	-				+0.7
1,249,309	-				+1.0
1,249,344	-				-0.8
1,249,380	+				-1.4
1,249,388	-				+2.3
1,249,413	+				-0.7
1,249,413	+				-0.7
1,249,421	-				+1.7