Strain Fitness in Dechlorosoma suillum PS around Dsui_2695

Experiment: Anaerobic growth in rich media with nitrate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2694 and Dsui_2695 are separated by 326 nucleotidesDsui_2695 and Dsui_2696 are separated by 5 nucleotides Dsui_2694: Dsui_2694 - ribosomal protein S2, at 2,845,815 to 2,846,564 _2694 Dsui_2695: Dsui_2695 - methionine aminopeptidase, type I, at 2,846,891 to 2,847,688 _2695 Dsui_2696: Dsui_2696 - (protein-PII) uridylyltransferase, at 2,847,694 to 2,850,285 _2696 Position (kb) 2846 2847 2848Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 2845.898 kb on - strand, within Dsui_2694at 2846.830 kb on + strandat 2846.830 kb on + strandat 2846.830 kb on + strandat 2846.844 kb on - strandat 2846.847 kb on + strandat 2846.847 kb on + strandat 2846.860 kb on + strandat 2846.871 kb on + strandat 2846.982 kb on + strand, within Dsui_2695at 2846.984 kb on - strand, within Dsui_2695at 2847.065 kb on + strand, within Dsui_2695at 2847.126 kb on + strand, within Dsui_2695at 2847.134 kb on - strand, within Dsui_2695at 2847.210 kb on - strandat 2847.229 kb on - strand, within Dsui_2695at 2847.254 kb on + strand, within Dsui_2695at 2847.317 kb on - strand, within Dsui_2695at 2847.319 kb on + strand, within Dsui_2695at 2847.337 kb on + strand, within Dsui_2695at 2847.449 kb on + strand, within Dsui_2695at 2847.450 kb on - strand, within Dsui_2695at 2847.466 kb on + strand, within Dsui_2695at 2847.494 kb on + strand, within Dsui_2695at 2847.515 kb on - strand, within Dsui_2695at 2847.644 kb on - strandat 2847.649 kb on - strandat 2847.667 kb on + strandat 2847.696 kb on + strandat 2847.715 kb on + strandat 2847.830 kb on + strandat 2847.838 kb on - strandat 2847.878 kb on + strandat 2847.918 kb on + strandat 2848.053 kb on - strandat 2848.115 kb on - strand, within Dsui_2696at 2848.175 kb on + strand, within Dsui_2696at 2848.191 kb on - strand, within Dsui_2696at 2848.226 kb on - strand, within Dsui_2696at 2848.299 kb on + strand, within Dsui_2696at 2848.306 kb on - strand, within Dsui_2696at 2848.338 kb on + strandat 2848.362 kb on - strand, within Dsui_2696at 2848.438 kb on + strand, within Dsui_2696at 2848.601 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with nitrate electron acceptor
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2,845,898 - Dsui_2694 0.11 -2.0
2,846,830 + +0.6
2,846,830 + -0.2
2,846,830 + +0.4
2,846,844 - -0.2
2,846,847 + +0.4
2,846,847 + -0.5
2,846,860 + +0.7
2,846,871 + +0.3
2,846,982 + Dsui_2695 0.11 +0.0
2,846,984 - Dsui_2695 0.12 -1.7
2,847,065 + Dsui_2695 0.22 +0.0
2,847,126 + Dsui_2695 0.29 +0.2
2,847,134 - Dsui_2695 0.30 -0.5
2,847,210 - -1.0
2,847,229 - Dsui_2695 0.42 +0.3
2,847,254 + Dsui_2695 0.45 +0.2
2,847,317 - Dsui_2695 0.53 -0.5
2,847,319 + Dsui_2695 0.54 +0.6
2,847,337 + Dsui_2695 0.56 +0.2
2,847,449 + Dsui_2695 0.70 +0.5
2,847,450 - Dsui_2695 0.70 +0.5
2,847,466 + Dsui_2695 0.72 -0.1
2,847,494 + Dsui_2695 0.76 +0.3
2,847,515 - Dsui_2695 0.78 -0.3
2,847,644 - +1.2
2,847,649 - +0.9
2,847,667 + +0.4
2,847,696 + -1.6
2,847,715 + -0.4
2,847,830 + -4.0
2,847,838 - -2.5
2,847,878 + -5.1
2,847,918 + -3.4
2,848,053 - +0.5
2,848,115 - Dsui_2696 0.16 -1.2
2,848,175 + Dsui_2696 0.19 -4.4
2,848,191 - Dsui_2696 0.19 -3.0
2,848,226 - Dsui_2696 0.21 -1.1
2,848,299 + Dsui_2696 0.23 -2.8
2,848,306 - Dsui_2696 0.24 -3.6
2,848,338 + +0.1
2,848,362 - Dsui_2696 0.26 -4.4
2,848,438 + Dsui_2696 0.29 -3.2
2,848,601 - -0.2

Or see this region's nucleotide sequence