Strain Fitness in Shewanella amazonensis SB2B around Sama_2163

Experiment: Tween 20

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tween 20
2,611,229	-		Sama_2161	0.62	-1.0
2,611,525	-				+0.8
2,611,528	+				+1.1
2,611,529	-				+1.0
2,611,529	-				+1.1
2,611,529	-				+0.6
2,611,529	-				-0.1
2,611,564	-				-0.1
2,611,567	-				-3.1
2,611,576	-				+0.6
2,611,624	+		Sama_2162	0.15	-0.1
2,611,624	+		Sama_2162	0.15	+0.5
2,611,625	-		Sama_2162	0.15	+1.8
2,611,625	-		Sama_2162	0.15	+0.9
2,611,625	-		Sama_2162	0.15	+0.3
2,611,625	-		Sama_2162	0.15	+1.4
2,611,626	+		Sama_2162	0.15	+1.7
2,611,626	+		Sama_2162	0.15	+0.4
2,611,627	-		Sama_2162	0.15	+0.7
2,611,683	-		Sama_2162	0.27	+1.5
2,611,730	+		Sama_2162	0.37	-0.1
2,611,730	+		Sama_2162	0.37	+1.8
2,611,731	-		Sama_2162	0.37	-0.9
2,611,869	-		Sama_2162	0.67	+0.9
2,611,869	-		Sama_2162	0.67	+1.8
2,611,921	-		Sama_2162	0.78	+2.2
2,611,921	-		Sama_2162	0.78	+1.4
2,611,962	+		Sama_2162	0.86	+2.2
2,612,018	-				+1.6
2,612,018	-				+1.5
2,612,025	+				+2.7
2,612,025	+				-0.3
2,612,044	-				+0.7
2,612,044	-				+2.4
2,612,066	-				-1.0
2,612,079	-				-0.6
2,612,153	-				+0.4
2,612,158	+				-0.4
2,612,158	+				-1.2
2,612,158	+				+0.1
2,612,158	+				+0.7
2,612,158	+				-1.0
2,612,158	+				+1.5
2,612,159	-				-0.8
2,612,159	-				+0.2
2,612,159	-				+0.4
2,612,159	-				+0.5
2,612,159	-				+1.0
2,612,159	-				+0.0
2,612,159	-				+0.6
2,612,159	-				+1.0
2,612,159	-				+0.4
2,612,159	-				+0.4
2,612,160	+				+0.8
2,612,160	+				-0.0
2,612,160	+				+0.8
2,612,160	+				-0.5
2,612,160	+				+0.2
2,612,160	+				-0.6
2,612,160	+				-0.0
2,612,160	+				+0.7
2,612,160	+				-0.3
2,612,160	+				+0.9
2,612,160	+				-0.6
2,612,160	+				+0.5
2,612,160	+				-0.8
2,612,160	+				+0.0
2,612,160	+				+1.1
2,612,160	+				+1.2
2,612,160	+				-0.6
2,612,160	+				-0.5
2,612,161	-				+3.2
2,612,161	-				+0.8
2,612,161	-				+0.8
2,612,161	-				+2.7
2,612,161	-				+0.2
2,612,161	-				+0.6
2,612,161	-				+0.6
2,612,162	+				+0.1
2,612,162	+				+1.2
2,612,162	+				+1.9
2,612,162	+				-0.6
2,612,163	-				+0.8
2,612,163	-				-2.0
2,612,239	+				+1.6
2,612,246	-				+1.7
2,612,274	-				+2.7
2,612,365	-				+1.4
2,612,429	-				+1.9
2,612,429	-				+0.8
2,612,440	-				+0.2
2,612,502	+		Sama_2163	0.11	+2.1
2,612,618	-		Sama_2163	0.15	+1.3
2,612,618	-		Sama_2163	0.15	+0.9
2,612,626	-		Sama_2163	0.16	+2.0
2,612,631	+		Sama_2163	0.16	+0.9
2,612,632	-		Sama_2163	0.16	+1.8
2,612,649	+		Sama_2163	0.16	+1.5
2,612,649	+		Sama_2163	0.16	+1.4
2,612,649	+		Sama_2163	0.16	+2.7
2,612,650	-		Sama_2163	0.16	+2.1
2,612,653	+		Sama_2163	0.17	+1.6
2,612,653	+		Sama_2163	0.17	+2.6
2,612,721	+		Sama_2163	0.19	+0.6
2,612,722	-		Sama_2163	0.19	+1.1
2,612,722	-		Sama_2163	0.19	+1.5
2,612,770	+		Sama_2163	0.21	+2.8
2,612,771	-		Sama_2163	0.21	+0.6
2,612,782	+		Sama_2163	0.21	+1.6
2,612,782	+		Sama_2163	0.21	-0.1
2,612,782	+		Sama_2163	0.21	+1.3
2,612,782	+		Sama_2163	0.21	+2.2
2,612,783	-		Sama_2163	0.21	+2.2
2,612,783	-		Sama_2163	0.21	+1.5
2,612,783	-		Sama_2163	0.21	+0.4
2,612,857	+		Sama_2163	0.24	+1.2
2,612,857	+		Sama_2163	0.24	+1.9
2,612,857	+		Sama_2163	0.24	+1.2
2,612,857	+		Sama_2163	0.24	-0.1
2,612,858	-		Sama_2163	0.24	+1.2
2,612,858	-		Sama_2163	0.24	+1.1
2,612,934	+		Sama_2163	0.27	-1.2
2,613,006	+		Sama_2163	0.29	+1.4
2,613,006	+		Sama_2163	0.29	+1.2
2,613,006	+		Sama_2163	0.29	+0.9
2,613,007	-		Sama_2163	0.29	+0.1
2,613,038	+		Sama_2163	0.30	+1.6
2,613,038	+		Sama_2163	0.30	+1.2
2,613,039	-		Sama_2163	0.30	+1.1
2,613,039	-		Sama_2163	0.30	+2.4
2,613,086	+		Sama_2163	0.32	+0.0
2,613,140	-		Sama_2163	0.34	+2.0
2,613,141	+		Sama_2163	0.34	+0.9
2,613,142	-		Sama_2163	0.34	+0.5
2,613,154	+		Sama_2163	0.35	+0.9
2,613,155	-		Sama_2163	0.35	+1.4
2,613,155	-		Sama_2163	0.35	+1.2
2,613,160	-		Sama_2163	0.35	+1.5
2,613,204	+		Sama_2163	0.36	+1.2
2,613,205	-		Sama_2163	0.36	+2.0
2,613,207	+		Sama_2163	0.36	+0.9
2,613,207	+		Sama_2163	0.36	+1.4
2,613,207	+		Sama_2163	0.36	+1.1
2,613,208	-		Sama_2163	0.36	+2.9
2,613,226	+		Sama_2163	0.37	+1.7
2,613,227	-		Sama_2163	0.37	+0.9
2,613,227	-		Sama_2163	0.37	+0.7
2,613,227	-		Sama_2163	0.37	+3.3
2,613,227	-		Sama_2163	0.37	+1.1
2,613,227	-		Sama_2163	0.37	+2.3
2,613,348	-		Sama_2163	0.41	+0.4
2,613,348	-		Sama_2163	0.41	+1.0
2,613,367	+		Sama_2163	0.42	+0.2
2,613,367	+		Sama_2163	0.42	+2.5
2,613,367	+		Sama_2163	0.42	+0.2
2,613,368	-		Sama_2163	0.42	+1.4
2,613,496	-		Sama_2163	0.47	+0.7
2,613,529	+		Sama_2163	0.48	+0.4
2,613,529	+		Sama_2163	0.48	+1.1
2,613,529	+		Sama_2163	0.48	-0.4
2,613,529	+		Sama_2163	0.48	+1.1
2,613,530	-		Sama_2163	0.48	+0.3
2,613,530	-		Sama_2163	0.48	+0.7
2,613,622	-		Sama_2163	0.51	-0.2
2,613,651	+		Sama_2163	0.52	+1.4
2,613,652	-		Sama_2163	0.52	+0.7
2,613,804	-		Sama_2163	0.58	+2.0
2,613,836	-		Sama_2163	0.59	-1.0
2,613,848	-		Sama_2163	0.59	+0.9
2,613,853	+		Sama_2163	0.60	+1.4
2,613,853	+		Sama_2163	0.60	+0.2
2,613,854	-		Sama_2163	0.60	+1.8
2,613,854	-		Sama_2163	0.60	+1.3
2,613,854	-		Sama_2163	0.60	+1.1
2,613,854	-		Sama_2163	0.60	+1.4
2,613,854	-		Sama_2163	0.60	+1.8
2,613,854	-		Sama_2163	0.60	+2.2
2,613,875	+		Sama_2163	0.60	+1.4
2,613,876	-		Sama_2163	0.60	+2.1
2,613,881	-		Sama_2163	0.61	+1.1
2,613,890	-		Sama_2163	0.61	+0.4
2,613,908	+		Sama_2163	0.62	+1.4
2,613,908	+		Sama_2163	0.62	+1.5
2,613,909	-		Sama_2163	0.62	+1.3
2,613,963	+		Sama_2163	0.64	+3.1
2,614,006	-		Sama_2163	0.65	+0.5
2,614,012	-		Sama_2163	0.65	+0.6
2,614,039	+		Sama_2163	0.66	+1.0
2,614,074	-		Sama_2163	0.67	+0.9
2,614,074	-		Sama_2163	0.67	+0.5
2,614,111	+		Sama_2163	0.69	+1.7
2,614,111	+		Sama_2163	0.69	+2.0
2,614,111	+		Sama_2163	0.69	+0.9
2,614,112	-		Sama_2163	0.69	+0.6
2,614,112	-		Sama_2163	0.69	+1.9
2,614,112	-		Sama_2163	0.69	+2.5
2,614,112	-		Sama_2163	0.69	+1.0
2,614,112	-		Sama_2163	0.69	+1.7
2,614,216	+		Sama_2163	0.73	+2.1
2,614,216	+		Sama_2163	0.73	-0.2
2,614,217	-		Sama_2163	0.73	+1.1
2,614,217	-		Sama_2163	0.73	+2.9
2,614,217	-		Sama_2163	0.73	+1.2
2,614,326	+		Sama_2163	0.77	+2.4
2,614,326	+		Sama_2163	0.77	+0.9
2,614,326	+		Sama_2163	0.77	+0.7
2,614,326	+		Sama_2163	0.77	+0.4
2,614,326	+		Sama_2163	0.77	+2.0
2,614,327	-		Sama_2163	0.77	+0.1
2,614,327	-		Sama_2163	0.77	+1.7
2,614,360	-		Sama_2163	0.78	+0.9
2,614,380	+		Sama_2163	0.78	+1.0
2,614,380	+		Sama_2163	0.78	+1.7
2,614,381	-		Sama_2163	0.78	+1.1
2,614,381	-		Sama_2163	0.78	+2.5
2,614,381	-		Sama_2163	0.78	+1.4
2,614,381	-		Sama_2163	0.78	+0.4
2,614,381	-		Sama_2163	0.78	+0.8
2,614,381	-		Sama_2163	0.78	+1.6
2,614,381	-		Sama_2163	0.78	+0.7
2,614,381	-		Sama_2163	0.78	+0.4
2,614,384	-		Sama_2163	0.79	+1.7
2,614,391	-		Sama_2163	0.79	-1.0
2,614,393	+		Sama_2163	0.79	+0.8
2,614,394	-		Sama_2163	0.79	+2.3
2,614,394	-		Sama_2163	0.79	+0.5
2,614,501	+		Sama_2163	0.83	+1.5
2,614,502	-		Sama_2163	0.83	+2.1
2,614,502	-		Sama_2163	0.83	+0.8
2,614,502	-		Sama_2163	0.83	+1.8
2,614,502	-		Sama_2163	0.83	+0.8
2,614,502	-		Sama_2163	0.83	+1.5
2,614,503	+		Sama_2163	0.83	+1.7
2,614,504	-		Sama_2163	0.83	+0.9
2,614,504	-		Sama_2163	0.83	+1.8
2,614,504	-		Sama_2163	0.83	+0.5
2,614,504	-		Sama_2163	0.83	+0.4
2,614,504	-		Sama_2163	0.83	+0.0
2,614,504	-		Sama_2163	0.83	+2.4
2,614,504	-		Sama_2163	0.83	+1.2
2,614,504	-		Sama_2163	0.83	+1.2
2,614,519	+		Sama_2163	0.83	+0.8
2,614,520	-		Sama_2163	0.83	+2.1
2,614,520	-		Sama_2163	0.83	+1.5
2,614,583	+		Sama_2163	0.86	+0.8
2,614,583	+		Sama_2163	0.86	+1.7
2,614,584	-		Sama_2163	0.86	+0.7
2,614,584	-		Sama_2163	0.86	+0.5
2,614,627	+		Sama_2163	0.87	+0.8
2,614,712	+				+1.5
2,614,745	+				+0.4
2,614,745	+				+3.1
2,614,745	+				+1.1
2,614,745	+				+1.5
2,614,745	+				-0.1
2,614,745	+				+0.7
2,614,745	+				+1.9
2,614,746	-				+0.8
2,614,746	-				+1.1
2,614,746	-				+1.2
2,614,746	-				-1.5
2,614,746	-				-0.6
2,614,749	+				+0.6
2,614,749	+				+0.4
2,614,749	+				+1.7
2,614,749	+				+0.5
2,614,749	+				+0.4
2,614,749	+				+0.1
2,614,750	-				+1.5
2,614,750	-				+2.1
2,614,750	-				+2.7
2,614,750	-				+0.8
2,614,750	-				+0.5
2,614,752	+				+0.5
2,614,753	-				+1.9
2,614,753	-				+0.9
2,614,759	+				+1.5
2,614,760	-				+0.8
2,614,760	-				+0.5
2,614,767	+				+1.1
2,614,871	+				+1.7
2,614,950	+				-0.6
2,614,965	+				-1.6
2,614,979	-				+0.1
2,614,996	+				-1.5
2,614,996	+				-0.3
2,614,996	+				-0.4
2,614,996	+				+0.1
2,614,996	+				+0.8
2,614,996	+				+0.6
2,614,996	+				-0.4
2,614,997	-				+0.1
2,615,044	-				-0.2
2,615,052	+				+0.4
2,615,053	-				-1.6
2,615,053	-				+0.4
2,615,065	-				+0.9
2,615,078	+				+0.0
2,615,078	+				+0.5
2,615,078	+				-0.1
2,615,078	+				-0.6
2,615,078	+				-0.3
2,615,078	+				+0.5
2,615,079	-				-1.2
2,615,079	-				-0.1
2,615,079	-				-0.1
2,615,079	-				-0.2
2,615,105	+				+1.0
2,615,106	-				+1.0
2,615,158	-				+0.5
2,615,158	-				+0.3
2,615,166	+				+0.5
2,615,167	-				+1.7
2,615,167	-				-0.1
2,615,167	-				-0.1
2,615,173	-				-0.5
2,615,274	+				-0.9
2,615,290	-				-1.2
2,615,312	-				-0.2
2,615,318	-				-0.9
2,615,329	+				+0.6
2,615,330	-				-1.2
2,615,337	+				+1.0
2,615,338	-				+0.2
2,615,346	+				+0.9
2,615,364	-				+0.4
2,615,364	-				-0.4
2,615,367	+				-0.4
2,615,368	-				+0.8
2,615,368	-				-0.3
2,615,368	-				+0.8
2,615,368	-				-0.0
2,615,416	-				-0.2
2,615,474	-				+1.7
2,615,474	-				+1.4
2,615,481	+				+0.4
2,615,504	-				+0.2
2,615,504	-				+0.3
2,615,605	+				+0.9
2,615,893	-		Sama_2164	0.14	-0.6
2,615,928	+		Sama_2164	0.14	-0.3