Strain Fitness in Shewanella amazonensis SB2B around Sama_1079

Experiment: Tween 20

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tween 20
1,306,200	+		Sama_1078	0.54	+1.8
1,306,200	+		Sama_1078	0.54	+1.1
1,306,201	-		Sama_1078	0.54	+0.4
1,306,201	-		Sama_1078	0.54	-1.1
1,306,206	+		Sama_1078	0.54	+0.1
1,306,206	+		Sama_1078	0.54	+0.5
1,306,225	+		Sama_1078	0.55	-0.5
1,306,365	+		Sama_1078	0.63	+1.5
1,306,366	-		Sama_1078	0.63	-0.2
1,306,366	-		Sama_1078	0.63	+0.6
1,306,369	+		Sama_1078	0.63	-2.0
1,306,375	-		Sama_1078	0.63	+1.0
1,306,375	-		Sama_1078	0.63	+0.1
1,306,447	+		Sama_1078	0.67	+0.3
1,306,447	+		Sama_1078	0.67	-0.6
1,306,447	+		Sama_1078	0.67	+0.7
1,306,447	+		Sama_1078	0.67	-0.4
1,306,448	-		Sama_1078	0.68	+2.5
1,306,448	-		Sama_1078	0.68	-0.2
1,306,448	-		Sama_1078	0.68	+0.2
1,306,448	-		Sama_1078	0.68	-0.3
1,306,448	-		Sama_1078	0.68	-0.4
1,306,448	-		Sama_1078	0.68	-0.7
1,306,448	-		Sama_1078	0.68	-0.3
1,306,459	+		Sama_1078	0.68	-1.5
1,306,459	+		Sama_1078	0.68	+0.4
1,306,459	+		Sama_1078	0.68	-0.9
1,306,459	+		Sama_1078	0.68	-0.7
1,306,459	+		Sama_1078	0.68	-2.0
1,306,460	-		Sama_1078	0.68	-1.0
1,306,460	-		Sama_1078	0.68	-1.0
1,306,499	-		Sama_1078	0.70	-0.7
1,306,533	+		Sama_1078	0.72	+0.2
1,306,534	-		Sama_1078	0.72	+0.8
1,306,534	-		Sama_1078	0.72	+0.7
1,306,534	-		Sama_1078	0.72	+0.4
1,306,567	+		Sama_1078	0.74	+1.6
1,306,568	-		Sama_1078	0.74	-1.1
1,306,594	-		Sama_1078	0.76	-0.5
1,306,628	+		Sama_1078	0.78	-0.1
1,306,628	+		Sama_1078	0.78	+0.5
1,306,628	+		Sama_1078	0.78	-1.2
1,306,629	-		Sama_1078	0.78	-0.8
1,306,629	-		Sama_1078	0.78	+2.1
1,306,629	-		Sama_1078	0.78	+0.5
1,306,715	+		Sama_1078	0.82	+0.8
1,306,716	-		Sama_1078	0.82	+1.5
1,306,716	-		Sama_1078	0.82	+0.2
1,306,716	-		Sama_1078	0.82	-0.3
1,306,823	+		Sama_1078	0.88	+0.8
1,306,823	+		Sama_1078	0.88	-0.1
1,306,823	+		Sama_1078	0.88	+2.1
1,306,824	-		Sama_1078	0.88	-0.5
1,306,824	-		Sama_1078	0.88	-0.4
1,306,827	+		Sama_1078	0.89	-1.6
1,306,840	+		Sama_1078	0.89	-1.5
1,306,841	-		Sama_1078	0.89	-0.6
1,306,851	-		Sama_1078	0.90	+0.3
1,306,922	+				-0.1
1,306,922	+				-0.3
1,306,923	-				-0.3
1,306,928	+				+2.3
1,306,960	+				+0.5
1,306,960	+				-0.0
1,306,960	+				-0.4
1,306,960	+				+0.7
1,306,960	+				+0.4
1,306,960	+				-0.6
1,306,960	+				-0.7
1,306,960	+				-0.1
1,306,960	+				-0.4
1,306,960	+				+1.2
1,306,960	+				+0.0
1,306,961	-				-0.9
1,306,961	-				-1.4
1,306,961	-				+0.3
1,306,961	-				+0.4
1,306,961	-				-0.1
1,306,961	-				+0.2
1,306,961	-				+2.1
1,306,961	-				-0.2
1,306,961	-				+0.2
1,306,981	+				+1.5
1,306,981	+				-0.6
1,306,981	+				-0.4
1,306,981	+				-0.6
1,306,981	+				-0.1
1,306,981	+				-0.1
1,306,981	+				+0.5
1,306,981	+				-2.1
1,306,982	-				-1.1
1,306,982	-				-0.2
1,306,982	-				-2.2
1,307,015	+				+0.1
1,307,029	+				+1.2
1,307,030	-				+1.5
1,307,032	+				+0.1
1,307,092	+				-0.2
1,307,093	-				+0.6
1,307,093	-				-1.3
1,307,105	-				+0.2
1,307,105	-				-0.6
1,307,137	-				-0.6
1,307,255	+		Sama_1079	0.21	+1.0
1,307,255	+		Sama_1079	0.21	+0.2
1,307,256	-		Sama_1079	0.22	-0.4
1,307,256	-		Sama_1079	0.22	-0.9
1,307,256	-		Sama_1079	0.22	+0.1
1,307,256	-		Sama_1079	0.22	+0.2
1,307,333	+		Sama_1079	0.51	-1.1
1,307,333	+		Sama_1079	0.51	-2.7
1,307,333	+		Sama_1079	0.51	-0.5
1,307,334	-		Sama_1079	0.51	-1.4
1,307,334	-		Sama_1079	0.51	-0.4
1,307,334	-		Sama_1079	0.51	+0.4
1,307,414	+		Sama_1079	0.81	-0.8
1,307,414	+		Sama_1079	0.81	-0.6
1,307,414	+		Sama_1079	0.81	-0.1
1,307,415	-		Sama_1079	0.81	-2.4
1,307,531	-				+1.0
1,307,531	-				+0.3
1,307,533	+				+1.5
1,307,534	-				-0.9
1,307,534	-				-0.3
1,307,656	+				-0.3
1,307,813	-		Sama_1080	0.27	+0.5
1,307,813	-		Sama_1080	0.27	+0.9
1,307,842	+		Sama_1080	0.33	-0.5
1,307,842	+		Sama_1080	0.33	+0.8
1,307,843	-		Sama_1080	0.33	-0.6
1,307,843	-		Sama_1080	0.33	+0.5
1,307,852	-		Sama_1080	0.35	-0.6
1,307,997	-		Sama_1080	0.64	-0.2
1,308,018	+		Sama_1080	0.69	+0.3
1,308,018	+		Sama_1080	0.69	+0.4
1,308,018	+		Sama_1080	0.69	+1.0
1,308,018	+		Sama_1080	0.69	-0.8
1,308,019	-		Sama_1080	0.69	+0.8
1,308,019	-		Sama_1080	0.69	+0.5
1,308,019	-		Sama_1080	0.69	-0.2
1,308,048	+		Sama_1080	0.75	+0.0
1,308,048	+		Sama_1080	0.75	+0.2
1,308,049	-		Sama_1080	0.75	+1.1
1,308,058	+		Sama_1080	0.77	-0.8
1,308,079	+		Sama_1080	0.81	-0.2
1,308,080	-		Sama_1080	0.81	-0.5
1,308,092	+		Sama_1080	0.84	+0.5
1,308,092	+		Sama_1080	0.84	-0.2
1,308,093	-		Sama_1080	0.84	+0.3
1,308,093	-		Sama_1080	0.84	+1.1
1,308,093	-		Sama_1080	0.84	+0.4
1,308,159	+				-0.4
1,308,159	+				+1.2
1,308,159	+				-0.4
1,308,160	-				-0.0
1,308,172	+				+0.0
1,308,209	+				-0.8
1,308,210	-				-0.1
1,308,210	-				+0.5
1,308,210	-				-1.5
1,308,251	+				-0.2
1,308,266	+				-0.1
1,308,267	-				-1.8
1,308,286	-				-1.1
1,308,286	-				+1.0
1,308,286	-				+0.3
1,308,286	-				-0.2
1,308,287	+				-0.7
1,308,287	+				-1.3
1,308,288	-				-2.3
1,308,288	-				-0.3
1,308,288	-				+0.5
1,308,304	+				-1.1
1,308,305	-				+0.5
1,308,386	+				+0.4
1,308,395	+				-2.3
1,308,395	+				+1.9
1,308,396	-				-1.3