Strain Fitness in Marinobacter adhaerens HP15 around HP15_1799
Experiment: m.b. Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,891,223 | - | HP15_1798 | 0.45 | -2.2 | |
1,891,311 | - | HP15_1798 | 0.53 | +0.2 | |
1,891,408 | + | HP15_1798 | 0.63 | -0.9 | |
1,891,413 | + | HP15_1798 | 0.63 | -0.4 | |
1,891,445 | + | HP15_1798 | 0.66 | -0.2 | |
1,891,479 | + | HP15_1798 | 0.69 | -0.2 | |
1,891,704 | + | -0.2 | |||
1,892,011 | - | +2.0 | |||
1,892,098 | + | HP15_1799 | 0.19 | +2.2 | |
1,892,105 | - | HP15_1799 | 0.22 | +2.0 | |
1,892,105 | - | HP15_1799 | 0.22 | +2.2 | |
1,892,105 | - | HP15_1799 | 0.22 | +1.4 | |
1,892,140 | - | HP15_1799 | 0.33 | +1.9 | |
1,892,203 | + | HP15_1799 | 0.53 | +2.3 | |
1,892,211 | - | HP15_1799 | 0.55 | +2.4 | |
1,892,213 | + | HP15_1799 | 0.56 | +1.7 | |
1,892,283 | + | HP15_1799 | 0.78 | +2.0 | |
1,892,336 | + | +2.0 | |||
1,892,635 | - | HP15_1800 | 0.34 | -0.1 | |
1,892,642 | + | HP15_1800 | 0.35 | +0.2 | |
1,892,658 | - | HP15_1800 | 0.38 | -0.6 | |
1,892,841 | - | HP15_1800 | 0.66 | -0.5 | |
1,892,867 | - | HP15_1800 | 0.70 | +0.5 | |
1,892,906 | + | HP15_1800 | 0.76 | -0.1 | |
1,893,018 | - | -0.5 | |||
1,893,312 | + | HP15_1801 | 0.14 | -0.6 | |
1,893,319 | + | HP15_1801 | 0.15 | +0.8 | |
1,893,325 | - | HP15_1801 | 0.15 | -0.1 |
Or see this region's nucleotide sequence