Strain Fitness in Marinobacter adhaerens HP15 around HP15_1000
Experiment: m.b. Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,008,931 | - | HP15_999 | 0.45 | +0.9 | |
1,008,938 | - | HP15_999 | 0.46 | -1.3 | |
1,008,981 | + | HP15_999 | 0.48 | -0.3 | |
1,008,989 | - | HP15_999 | 0.49 | +1.4 | |
1,009,038 | + | HP15_999 | 0.52 | -0.1 | |
1,009,070 | + | HP15_999 | 0.54 | -0.3 | |
1,009,097 | - | HP15_999 | 0.55 | -0.2 | |
1,009,120 | - | HP15_999 | 0.57 | +0.3 | |
1,009,211 | - | HP15_999 | 0.62 | -0.1 | |
1,009,211 | - | HP15_999 | 0.62 | +0.8 | |
1,009,216 | - | HP15_999 | 0.63 | +0.0 | |
1,009,240 | + | HP15_999 | 0.64 | +0.3 | |
1,009,411 | + | HP15_999 | 0.74 | +0.2 | |
1,009,419 | - | HP15_999 | 0.75 | -0.3 | |
1,009,419 | - | HP15_999 | 0.75 | +0.1 | |
1,009,499 | - | HP15_999 | 0.80 | -0.8 | |
1,009,563 | - | HP15_999 | 0.84 | +0.3 | |
1,009,686 | + | -0.2 | |||
1,009,755 | + | +0.5 | |||
1,009,755 | + | -0.7 | |||
1,009,848 | + | +0.3 | |||
1,009,872 | - | +0.0 | |||
1,009,926 | - | -0.4 | |||
1,009,985 | + | HP15_1000 | 0.10 | -0.9 | |
1,010,119 | + | HP15_1000 | 0.33 | -0.0 | |
1,010,179 | - | HP15_1000 | 0.44 | +1.1 | |
1,010,361 | + | HP15_1000 | 0.75 | +0.9 |
Or see this region's nucleotide sequence