Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3101 and Dsui_3102 are separated by 62 nucleotides Dsui_3102 and Dsui_3103 are separated by 165 nucleotides
Dsui_3101: Dsui_3101 - transcriptional regulator, at 3,319,234 to 3,320,133
_3101
Dsui_3102: Dsui_3102 - molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial, at 3,320,196 to 3,320,792
_3102
Dsui_3103: Dsui_3103 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 3,320,958 to 3,322,157
_3103
Position (kb)
3320
3321 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3319.224 kb on + strand at 3319.265 kb on - strand at 3319.275 kb on + strand at 3319.330 kb on + strand, within Dsui_3101 at 3319.364 kb on + strand, within Dsui_3101 at 3319.391 kb on + strand, within Dsui_3101 at 3319.399 kb on - strand at 3319.731 kb on + strand, within Dsui_3101 at 3319.765 kb on + strand, within Dsui_3101 at 3319.770 kb on + strand, within Dsui_3101 at 3320.041 kb on + strand, within Dsui_3101 at 3320.182 kb on - strand at 3320.205 kb on + strand at 3320.250 kb on + strand at 3320.357 kb on + strand, within Dsui_3102 at 3320.392 kb on - strand at 3320.404 kb on - strand at 3320.404 kb on - strand at 3320.570 kb on + strand, within Dsui_3102 at 3320.573 kb on - strand at 3320.683 kb on + strand, within Dsui_3102 at 3320.686 kb on + strand, within Dsui_3102 at 3320.840 kb on - strand at 3320.973 kb on - strand at 3320.973 kb on - strand at 3320.982 kb on - strand at 3321.027 kb on - strand at 3321.079 kb on + strand, within Dsui_3103 at 3321.089 kb on + strand, within Dsui_3103 at 3321.102 kb on + strand, within Dsui_3103 at 3321.110 kb on - strand at 3321.110 kb on - strand, within Dsui_3103 at 3321.112 kb on + strand, within Dsui_3103 at 3321.115 kb on - strand at 3321.136 kb on + strand, within Dsui_3103 at 3321.203 kb on + strand, within Dsui_3103 at 3321.319 kb on - strand, within Dsui_3103 at 3321.337 kb on - strand, within Dsui_3103 at 3321.359 kb on + strand, within Dsui_3103 at 3321.359 kb on + strand, within Dsui_3103 at 3321.372 kb on - strand, within Dsui_3103 at 3321.465 kb on + strand, within Dsui_3103 at 3321.519 kb on - strand, within Dsui_3103 at 3321.643 kb on - strand, within Dsui_3103 at 3321.682 kb on + strand, within Dsui_3103 at 3321.748 kb on + strand, within Dsui_3103
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 3,319,224 + +0.7 3,319,265 - +0.5 3,319,275 + -1.2 3,319,330 + Dsui_3101 0.11 +0.3 3,319,364 + Dsui_3101 0.14 -0.5 3,319,391 + Dsui_3101 0.17 +0.1 3,319,399 - +1.1 3,319,731 + Dsui_3101 0.55 +0.9 3,319,765 + Dsui_3101 0.59 +0.6 3,319,770 + Dsui_3101 0.60 +0.7 3,320,041 + Dsui_3101 0.90 +2.4 3,320,182 - +2.1 3,320,205 + +1.0 3,320,250 + -1.7 3,320,357 + Dsui_3102 0.27 -0.7 3,320,392 - +0.5 3,320,404 - +2.1 3,320,404 - +1.1 3,320,570 + Dsui_3102 0.63 -0.9 3,320,573 - +1.1 3,320,683 + Dsui_3102 0.82 -0.2 3,320,686 + Dsui_3102 0.82 -2.3 3,320,840 - +4.3 3,320,973 - +0.5 3,320,973 - +1.8 3,320,982 - +2.1 3,321,027 - +2.1 3,321,079 + Dsui_3103 0.10 +2.6 3,321,089 + Dsui_3103 0.11 +2.6 3,321,102 + Dsui_3103 0.12 +2.2 3,321,110 - +1.1 3,321,110 - Dsui_3103 0.13 +3.8 3,321,112 + Dsui_3103 0.13 +1.8 3,321,115 - +0.5 3,321,136 + Dsui_3103 0.15 +2.9 3,321,203 + Dsui_3103 0.20 +2.0 3,321,319 - Dsui_3103 0.30 +2.0 3,321,337 - Dsui_3103 0.32 +2.4 3,321,359 + Dsui_3103 0.33 +1.6 3,321,359 + Dsui_3103 0.33 +2.0 3,321,372 - Dsui_3103 0.34 +1.5 3,321,465 + Dsui_3103 0.42 +1.8 3,321,519 - Dsui_3103 0.47 +2.5 3,321,643 - Dsui_3103 0.57 +1.9 3,321,682 + Dsui_3103 0.60 +1.9 3,321,748 + Dsui_3103 0.66 +1.5
Or see this region's nucleotide sequence