Strain Fitness in Dechlorosoma suillum PS around Dsui_2859

Experiment: Anaero. lactate (C), perchlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2858 and Dsui_2859 are separated by 227 nucleotidesDsui_2859 and Dsui_2860 are separated by 36 nucleotides Dsui_2858: Dsui_2858 - lipoprotein releasing system, transmembrane protein, LolC/E family, at 3,047,412 to 3,048,659 _2858 Dsui_2859: Dsui_2859 - hypothetical protein, at 3,048,887 to 3,049,954 _2859 Dsui_2860: Dsui_2860 - single-stranded-DNA-specific exonuclease RecJ, at 3,049,991 to 3,051,688 _2860 Position (kb) 3048 3049 3050Strain fitness (log2 ratio) -1 0 1 2at 3048.661 kb on - strandat 3048.661 kb on - strandat 3048.784 kb on - strandat 3048.836 kb on - strandat 3048.873 kb on + strandat 3048.877 kb on + strandat 3048.877 kb on + strandat 3049.954 kb on + strandat 3049.954 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor
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3,048,661 - -0.1
3,048,661 - +0.2
3,048,784 - +1.9
3,048,836 - +1.7
3,048,873 + +1.7
3,048,877 + -0.1
3,048,877 + -0.1
3,049,954 + -0.1
3,049,954 + -0.7

Or see this region's nucleotide sequence