Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2711 and Dsui_2712 are separated by 2 nucleotides Dsui_2712 and Dsui_2713 are separated by 260 nucleotides
Dsui_2711: Dsui_2711 - succinyl-diaminopimelate desuccinylase, at 2,867,837 to 2,868,988
_2711
Dsui_2712: Dsui_2712 - protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific, at 2,868,991 to 2,869,887
_2712
Dsui_2713: Dsui_2713 - membrane protease subunit, stomatin/prohibitin, at 2,870,148 to 2,871,041
_2713
Position (kb)
2868
2869
2870 Strain fitness (log2 ratio)
-1
0
1
2 at 2869.038 kb on + strand at 2869.141 kb on - strand, within Dsui_2712 at 2869.141 kb on - strand, within Dsui_2712 at 2869.187 kb on - strand, within Dsui_2712 at 2869.190 kb on - strand, within Dsui_2712 at 2869.194 kb on + strand, within Dsui_2712 at 2869.261 kb on + strand, within Dsui_2712 at 2869.294 kb on - strand, within Dsui_2712 at 2869.466 kb on + strand, within Dsui_2712 at 2869.495 kb on - strand, within Dsui_2712 at 2869.502 kb on + strand, within Dsui_2712 at 2869.506 kb on - strand at 2869.661 kb on + strand, within Dsui_2712 at 2869.702 kb on - strand, within Dsui_2712 at 2869.702 kb on - strand, within Dsui_2712 at 2869.745 kb on - strand, within Dsui_2712 at 2869.813 kb on + strand at 2869.889 kb on + strand at 2869.891 kb on - strand at 2869.940 kb on - strand at 2870.006 kb on + strand at 2870.027 kb on - strand at 2870.117 kb on - strand at 2870.201 kb on - strand at 2870.222 kb on - strand at 2870.254 kb on + strand, within Dsui_2713 at 2870.262 kb on - strand, within Dsui_2713 at 2870.340 kb on + strand, within Dsui_2713 at 2870.357 kb on + strand, within Dsui_2713 at 2870.471 kb on - strand, within Dsui_2713 at 2870.574 kb on + strand, within Dsui_2713 at 2870.628 kb on - strand, within Dsui_2713 at 2870.656 kb on - strand, within Dsui_2713 at 2870.726 kb on + strand, within Dsui_2713 at 2870.726 kb on + strand, within Dsui_2713 at 2870.818 kb on - strand, within Dsui_2713 at 2870.878 kb on - strand, within Dsui_2713
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,869,038 + -1.0 2,869,141 - Dsui_2712 0.17 -1.1 2,869,141 - Dsui_2712 0.17 +0.3 2,869,187 - Dsui_2712 0.22 +0.1 2,869,190 - Dsui_2712 0.22 -0.1 2,869,194 + Dsui_2712 0.23 +0.2 2,869,261 + Dsui_2712 0.30 -0.6 2,869,294 - Dsui_2712 0.34 +0.1 2,869,466 + Dsui_2712 0.53 -0.4 2,869,495 - Dsui_2712 0.56 +0.3 2,869,502 + Dsui_2712 0.57 -0.2 2,869,506 - +2.4 2,869,661 + Dsui_2712 0.75 -1.5 2,869,702 - Dsui_2712 0.79 +0.1 2,869,702 - Dsui_2712 0.79 +0.1 2,869,745 - Dsui_2712 0.84 -0.1 2,869,813 + -0.3 2,869,889 + +0.1 2,869,891 - +1.2 2,869,940 - +0.4 2,870,006 + -0.1 2,870,027 - +0.9 2,870,117 - +1.1 2,870,201 - +0.0 2,870,222 - -0.1 2,870,254 + Dsui_2713 0.12 +0.3 2,870,262 - Dsui_2713 0.13 -0.2 2,870,340 + Dsui_2713 0.21 +0.5 2,870,357 + Dsui_2713 0.23 +0.4 2,870,471 - Dsui_2713 0.36 -0.8 2,870,574 + Dsui_2713 0.48 +0.2 2,870,628 - Dsui_2713 0.54 -0.2 2,870,656 - Dsui_2713 0.57 -0.4 2,870,726 + Dsui_2713 0.65 -0.8 2,870,726 + Dsui_2713 0.65 -0.9 2,870,818 - Dsui_2713 0.75 -0.1 2,870,878 - Dsui_2713 0.82 -0.0
Or see this region's nucleotide sequence