Strain Fitness in Dechlorosoma suillum PS around Dsui_2702

Experiment: Anaero. lactate (C), perchlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2701 and Dsui_2702 overlap by 1 nucleotidesDsui_2702 and Dsui_2703 are separated by 22 nucleotides Dsui_2701: Dsui_2701 - DNA ligase, NAD-dependent, at 2,853,110 to 2,855,500 _2701 Dsui_2702: Dsui_2702 - cell division protein, at 2,855,500 to 2,856,933 _2702 Dsui_2703: Dsui_2703 - chromosome segregation protein SMC, at 2,856,956 to 2,860,465 _2703 Position (kb) 2855 2856 2857Strain fitness (log2 ratio) -1 0 1 2at 2855.469 kb on + strandat 2855.642 kb on - strandat 2855.809 kb on - strand, within Dsui_2702at 2856.054 kb on - strand, within Dsui_2702at 2856.466 kb on - strand, within Dsui_2702at 2856.754 kb on - strand, within Dsui_2702at 2856.763 kb on - strand, within Dsui_2702at 2856.970 kb on - strandat 2857.127 kb on - strandat 2857.140 kb on - strandat 2857.165 kb on - strandat 2857.186 kb on + strandat 2857.208 kb on - strandat 2857.265 kb on - strandat 2857.498 kb on - strand, within Dsui_2703at 2857.614 kb on - strand, within Dsui_2703at 2857.638 kb on - strand, within Dsui_2703

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor
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2,855,469 + +0.4
2,855,642 - -1.4
2,855,809 - Dsui_2702 0.22 +0.5
2,856,054 - Dsui_2702 0.39 -0.7
2,856,466 - Dsui_2702 0.67 +1.9
2,856,754 - Dsui_2702 0.87 -0.5
2,856,763 - Dsui_2702 0.88 -0.0
2,856,970 - +0.3
2,857,127 - +0.9
2,857,140 - -0.1
2,857,165 - +0.4
2,857,186 + +0.9
2,857,208 - -0.6
2,857,265 - -0.0
2,857,498 - Dsui_2703 0.15 -0.1
2,857,614 - Dsui_2703 0.19 -0.1
2,857,638 - Dsui_2703 0.19 +0.9

Or see this region's nucleotide sequence