Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2497 and Dsui_2498 are separated by 16 nucleotides Dsui_2498 and Dsui_2499 overlap by 4 nucleotides Dsui_2499 and Dsui_2500 are separated by 52 nucleotides Dsui_2500 and Dsui_2501 are separated by 112 nucleotides
Dsui_2497: Dsui_2497 - mercuric reductase, at 2,645,125 to 2,646,771
_2497
Dsui_2498: Dsui_2498 - mercuric resistance transcriptional repressor protein MerD, at 2,646,788 to 2,647,153
_2498
Dsui_2499: Dsui_2499 - MerE protein, at 2,647,150 to 2,647,386
_2499
Dsui_2500: Dsui_2500 - site-specific recombinase, DNA invertase Pin, at 2,647,439 to 2,648,053
_2500
Dsui_2501: Dsui_2501 - TniQ protein, at 2,648,166 to 2,649,332
_2501
Position (kb)
2647
2648
2649 Strain fitness (log2 ratio)
-1
0
1
2 at 2646.490 kb on - strand, within Dsui_2497 at 2646.803 kb on - strand at 2646.852 kb on + strand, within Dsui_2498 at 2646.876 kb on + strand, within Dsui_2498 at 2646.908 kb on - strand at 2646.908 kb on - strand, within Dsui_2498 at 2646.942 kb on - strand, within Dsui_2498 at 2646.979 kb on - strand, within Dsui_2498 at 2647.155 kb on - strand at 2647.222 kb on + strand, within Dsui_2499 at 2647.227 kb on + strand, within Dsui_2499 at 2647.235 kb on - strand, within Dsui_2499 at 2647.299 kb on + strand, within Dsui_2499 at 2647.307 kb on - strand at 2647.324 kb on - strand at 2647.474 kb on - strand at 2647.692 kb on + strand, within Dsui_2500 at 2647.748 kb on + strand, within Dsui_2500 at 2647.769 kb on + strand, within Dsui_2500 at 2647.777 kb on - strand, within Dsui_2500 at 2647.798 kb on + strand at 2647.800 kb on + strand at 2647.823 kb on - strand, within Dsui_2500 at 2648.008 kb on + strand at 2648.016 kb on - strand at 2648.016 kb on - strand at 2648.016 kb on - strand at 2648.016 kb on - strand at 2648.016 kb on - strand at 2648.231 kb on + strand at 2648.239 kb on - strand at 2648.352 kb on + strand, within Dsui_2501 at 2648.419 kb on + strand, within Dsui_2501 at 2648.495 kb on + strand, within Dsui_2501 at 2648.643 kb on - strand at 2648.643 kb on - strand, within Dsui_2501 at 2648.646 kb on + strand, within Dsui_2501
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,646,490 - Dsui_2497 0.83 +0.2 2,646,803 - -0.6 2,646,852 + Dsui_2498 0.17 -0.5 2,646,876 + Dsui_2498 0.24 -0.5 2,646,908 - +2.1 2,646,908 - Dsui_2498 0.33 -0.5 2,646,942 - Dsui_2498 0.42 -1.2 2,646,979 - Dsui_2498 0.52 -0.3 2,647,155 - +0.1 2,647,222 + Dsui_2499 0.30 -0.8 2,647,227 + Dsui_2499 0.32 -0.0 2,647,235 - Dsui_2499 0.36 -0.2 2,647,299 + Dsui_2499 0.63 -0.9 2,647,307 - +0.1 2,647,324 - +1.4 2,647,474 - -0.6 2,647,692 + Dsui_2500 0.41 -0.5 2,647,748 + Dsui_2500 0.50 -0.2 2,647,769 + Dsui_2500 0.54 +0.6 2,647,777 - Dsui_2500 0.55 -1.0 2,647,798 + +1.4 2,647,800 + +0.8 2,647,823 - Dsui_2500 0.62 -0.2 2,648,008 + -0.1 2,648,016 - -0.5 2,648,016 - -0.3 2,648,016 - -0.2 2,648,016 - +0.1 2,648,016 - -0.8 2,648,231 + +0.2 2,648,239 - +1.4 2,648,352 + Dsui_2501 0.16 +0.2 2,648,419 + Dsui_2501 0.22 -0.1 2,648,495 + Dsui_2501 0.28 +0.4 2,648,643 - +0.2 2,648,643 - Dsui_2501 0.41 +1.6 2,648,646 + Dsui_2501 0.41 -1.1
Or see this region's nucleotide sequence