Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2491 and Dsui_2492 overlap by 4 nucleotides Dsui_2492 and Dsui_2493 are separated by 195 nucleotides Dsui_2493 and Dsui_2494 are separated by 71 nucleotides Dsui_2494 and Dsui_2495 are separated by 15 nucleotides Dsui_2495 and Dsui_2496 are separated by 2 nucleotides Dsui_2496 and Dsui_2497 overlap by 4 nucleotides
Dsui_2491: Dsui_2491 - transposase, TnpA family, at 2,639,903 to 2,642,932
_2491
Dsui_2492: Dsui_2492 - site-specific recombinase, DNA invertase Pin, at 2,642,929 to 2,643,537
_2492
Dsui_2493: Dsui_2493 - Hg(II)-responsive transcriptional regulator, at 2,643,733 to 2,644,167
_2493
Dsui_2494: Dsui_2494 - MerT mercuric transport protein, at 2,644,239 to 2,644,589
_2494
Dsui_2495: Dsui_2495 - mercuric transport protein periplasmic component, at 2,644,605 to 2,644,880
_2495
Dsui_2496: Dsui_2496 - Membrane transport protein MerF, at 2,644,883 to 2,645,128
_2496
Dsui_2497: Dsui_2497 - mercuric reductase, at 2,645,125 to 2,646,771
_2497
Position (kb)
2643
2644
2645 Strain fitness (log2 ratio)
-1
0
1
2 at 2642.772 kb on + strand at 2642.785 kb on + strand at 2642.793 kb on - strand at 2642.892 kb on + strand at 2642.900 kb on - strand at 2643.011 kb on - strand, within Dsui_2492 at 2643.011 kb on - strand, within Dsui_2492 at 2643.179 kb on + strand at 2643.182 kb on - strand, within Dsui_2492 at 2643.224 kb on - strand, within Dsui_2492 at 2643.373 kb on + strand, within Dsui_2492 at 2643.381 kb on - strand, within Dsui_2492 at 2643.463 kb on + strand, within Dsui_2492 at 2643.525 kb on + strand at 2643.533 kb on + strand at 2643.533 kb on + strand at 2643.554 kb on + strand at 2643.563 kb on - strand at 2643.730 kb on + strand at 2643.733 kb on - strand at 2643.738 kb on - strand at 2643.834 kb on - strand, within Dsui_2493 at 2643.845 kb on + strand, within Dsui_2493 at 2643.845 kb on + strand, within Dsui_2493 at 2643.884 kb on + strand, within Dsui_2493 at 2643.892 kb on - strand, within Dsui_2493 at 2643.910 kb on + strand, within Dsui_2493 at 2643.963 kb on + strand at 2643.970 kb on + strand, within Dsui_2493 at 2643.971 kb on - strand, within Dsui_2493 at 2644.060 kb on - strand, within Dsui_2493 at 2644.084 kb on - strand, within Dsui_2493 at 2644.098 kb on - strand, within Dsui_2493 at 2644.210 kb on + strand at 2644.269 kb on + strand at 2644.665 kb on + strand, within Dsui_2495 at 2644.672 kb on + strand, within Dsui_2495 at 2644.674 kb on + strand, within Dsui_2495 at 2644.680 kb on - strand, within Dsui_2495 at 2644.692 kb on + strand, within Dsui_2495 at 2644.700 kb on - strand, within Dsui_2495 at 2644.742 kb on + strand, within Dsui_2495 at 2644.798 kb on + strand, within Dsui_2495 at 2644.801 kb on - strand at 2644.809 kb on + strand, within Dsui_2495 at 2644.832 kb on + strand, within Dsui_2495 at 2644.866 kb on - strand at 2644.869 kb on + strand at 2644.869 kb on + strand at 2644.869 kb on + strand at 2644.877 kb on - strand at 2644.909 kb on + strand, within Dsui_2496 at 2644.953 kb on + strand, within Dsui_2496 at 2645.024 kb on - strand at 2645.084 kb on + strand, within Dsui_2496 at 2645.146 kb on + strand at 2645.146 kb on + strand at 2645.151 kb on + strand at 2645.151 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,642,772 + +0.4 2,642,785 + +0.1 2,642,793 - +0.4 2,642,892 + -0.4 2,642,900 - -0.5 2,643,011 - Dsui_2492 0.13 +1.4 2,643,011 - Dsui_2492 0.13 +1.0 2,643,179 + +0.8 2,643,182 - Dsui_2492 0.42 -0.2 2,643,224 - Dsui_2492 0.48 +0.3 2,643,373 + Dsui_2492 0.73 +0.4 2,643,381 - Dsui_2492 0.74 +1.3 2,643,463 + Dsui_2492 0.88 -0.8 2,643,525 + -0.3 2,643,533 + +1.4 2,643,533 + +1.7 2,643,554 + +1.0 2,643,563 - +0.7 2,643,730 + +0.3 2,643,733 - -0.4 2,643,738 - +0.9 2,643,834 - Dsui_2493 0.23 +0.1 2,643,845 + Dsui_2493 0.26 +0.0 2,643,845 + Dsui_2493 0.26 +0.0 2,643,884 + Dsui_2493 0.35 +0.1 2,643,892 - Dsui_2493 0.37 +1.5 2,643,910 + Dsui_2493 0.41 -0.6 2,643,963 + -0.4 2,643,970 + Dsui_2493 0.54 +0.8 2,643,971 - Dsui_2493 0.55 +0.4 2,644,060 - Dsui_2493 0.75 +0.8 2,644,084 - Dsui_2493 0.81 +0.4 2,644,098 - Dsui_2493 0.84 -0.0 2,644,210 + +0.4 2,644,269 + -1.3 2,644,665 + Dsui_2495 0.22 -0.2 2,644,672 + Dsui_2495 0.24 +2.0 2,644,674 + Dsui_2495 0.25 -0.5 2,644,680 - Dsui_2495 0.27 -0.4 2,644,692 + Dsui_2495 0.32 -0.0 2,644,700 - Dsui_2495 0.34 +0.8 2,644,742 + Dsui_2495 0.50 -0.1 2,644,798 + Dsui_2495 0.70 -0.3 2,644,801 - +1.4 2,644,809 + Dsui_2495 0.74 -0.9 2,644,832 + Dsui_2495 0.82 -1.2 2,644,866 - +0.1 2,644,869 + -0.9 2,644,869 + +0.1 2,644,869 + -0.5 2,644,877 - +1.4 2,644,909 + Dsui_2496 0.11 +0.7 2,644,953 + Dsui_2496 0.28 +0.2 2,645,024 - +0.8 2,645,084 + Dsui_2496 0.82 +0.6 2,645,146 + -0.1 2,645,146 + +0.0 2,645,151 + +0.1 2,645,151 + -0.5
Or see this region's nucleotide sequence