Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2491 and Dsui_2492 overlap by 4 nucleotides Dsui_2492 and Dsui_2493 are separated by 195 nucleotides Dsui_2493 and Dsui_2494 are separated by 71 nucleotides
Dsui_2491: Dsui_2491 - transposase, TnpA family, at 2,639,903 to 2,642,932
_2491
Dsui_2492: Dsui_2492 - site-specific recombinase, DNA invertase Pin, at 2,642,929 to 2,643,537
_2492
Dsui_2493: Dsui_2493 - Hg(II)-responsive transcriptional regulator, at 2,643,733 to 2,644,167
_2493
Dsui_2494: Dsui_2494 - MerT mercuric transport protein, at 2,644,239 to 2,644,589
_2494
Position (kb)
2642
2643
2644 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2641.931 kb on - strand, within Dsui_2491 at 2641.950 kb on + strand at 2642.064 kb on - strand, within Dsui_2491 at 2642.081 kb on - strand, within Dsui_2491 at 2642.109 kb on - strand, within Dsui_2491 at 2642.122 kb on + strand, within Dsui_2491 at 2642.130 kb on - strand, within Dsui_2491 at 2642.131 kb on - strand, within Dsui_2491 at 2642.133 kb on + strand, within Dsui_2491 at 2642.144 kb on + strand, within Dsui_2491 at 2642.298 kb on - strand, within Dsui_2491 at 2642.305 kb on + strand, within Dsui_2491 at 2642.647 kb on + strand at 2642.680 kb on + strand at 2642.726 kb on - strand at 2642.772 kb on + strand at 2642.785 kb on + strand at 2642.793 kb on - strand at 2642.892 kb on + strand at 2642.900 kb on - strand at 2643.011 kb on - strand, within Dsui_2492 at 2643.011 kb on - strand, within Dsui_2492 at 2643.179 kb on + strand at 2643.182 kb on - strand, within Dsui_2492 at 2643.224 kb on - strand, within Dsui_2492 at 2643.373 kb on + strand, within Dsui_2492 at 2643.381 kb on - strand, within Dsui_2492 at 2643.463 kb on + strand, within Dsui_2492 at 2643.525 kb on + strand at 2643.533 kb on + strand at 2643.533 kb on + strand at 2643.554 kb on + strand at 2643.563 kb on - strand at 2643.730 kb on + strand at 2643.733 kb on - strand at 2643.738 kb on - strand at 2643.834 kb on - strand, within Dsui_2493 at 2643.845 kb on + strand, within Dsui_2493 at 2643.845 kb on + strand, within Dsui_2493 at 2643.884 kb on + strand, within Dsui_2493 at 2643.892 kb on - strand, within Dsui_2493 at 2643.910 kb on + strand, within Dsui_2493 at 2643.963 kb on + strand at 2643.970 kb on + strand, within Dsui_2493 at 2643.971 kb on - strand, within Dsui_2493 at 2644.060 kb on - strand, within Dsui_2493 at 2644.084 kb on - strand, within Dsui_2493 at 2644.098 kb on - strand, within Dsui_2493 at 2644.210 kb on + strand at 2644.269 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,641,931 - Dsui_2491 0.67 +0.6 2,641,950 + +1.4 2,642,064 - Dsui_2491 0.71 -0.4 2,642,081 - Dsui_2491 0.72 -2.8 2,642,109 - Dsui_2491 0.73 +0.5 2,642,122 + Dsui_2491 0.73 +0.7 2,642,130 - Dsui_2491 0.73 -0.5 2,642,131 - Dsui_2491 0.74 +0.3 2,642,133 + Dsui_2491 0.74 -0.7 2,642,144 + Dsui_2491 0.74 -2.0 2,642,298 - Dsui_2491 0.79 +0.2 2,642,305 + Dsui_2491 0.79 -0.2 2,642,647 + -0.4 2,642,680 + -0.6 2,642,726 - -0.2 2,642,772 + +0.4 2,642,785 + +0.1 2,642,793 - +0.4 2,642,892 + -0.4 2,642,900 - -0.5 2,643,011 - Dsui_2492 0.13 +1.4 2,643,011 - Dsui_2492 0.13 +1.0 2,643,179 + +0.8 2,643,182 - Dsui_2492 0.42 -0.2 2,643,224 - Dsui_2492 0.48 +0.3 2,643,373 + Dsui_2492 0.73 +0.4 2,643,381 - Dsui_2492 0.74 +1.3 2,643,463 + Dsui_2492 0.88 -0.8 2,643,525 + -0.3 2,643,533 + +1.4 2,643,533 + +1.7 2,643,554 + +1.0 2,643,563 - +0.7 2,643,730 + +0.3 2,643,733 - -0.4 2,643,738 - +0.9 2,643,834 - Dsui_2493 0.23 +0.1 2,643,845 + Dsui_2493 0.26 +0.0 2,643,845 + Dsui_2493 0.26 +0.0 2,643,884 + Dsui_2493 0.35 +0.1 2,643,892 - Dsui_2493 0.37 +1.5 2,643,910 + Dsui_2493 0.41 -0.6 2,643,963 + -0.4 2,643,970 + Dsui_2493 0.54 +0.8 2,643,971 - Dsui_2493 0.55 +0.4 2,644,060 - Dsui_2493 0.75 +0.8 2,644,084 - Dsui_2493 0.81 +0.4 2,644,098 - Dsui_2493 0.84 -0.0 2,644,210 + +0.4 2,644,269 + -1.3
Or see this region's nucleotide sequence