Strain Fitness in Dechlorosoma suillum PS around Dsui_2492

Experiment: Anaero. lactate (C), perchlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2491 and Dsui_2492 overlap by 4 nucleotidesDsui_2492 and Dsui_2493 are separated by 195 nucleotidesDsui_2493 and Dsui_2494 are separated by 71 nucleotides Dsui_2491: Dsui_2491 - transposase, TnpA family, at 2,639,903 to 2,642,932 _2491 Dsui_2492: Dsui_2492 - site-specific recombinase, DNA invertase Pin, at 2,642,929 to 2,643,537 _2492 Dsui_2493: Dsui_2493 - Hg(II)-responsive transcriptional regulator, at 2,643,733 to 2,644,167 _2493 Dsui_2494: Dsui_2494 - MerT mercuric transport protein, at 2,644,239 to 2,644,589 _2494 Position (kb) 2642 2643 2644Strain fitness (log2 ratio) -3 -2 -1 0 1at 2641.931 kb on - strand, within Dsui_2491at 2641.950 kb on + strandat 2642.064 kb on - strand, within Dsui_2491at 2642.081 kb on - strand, within Dsui_2491at 2642.109 kb on - strand, within Dsui_2491at 2642.122 kb on + strand, within Dsui_2491at 2642.130 kb on - strand, within Dsui_2491at 2642.131 kb on - strand, within Dsui_2491at 2642.133 kb on + strand, within Dsui_2491at 2642.144 kb on + strand, within Dsui_2491at 2642.298 kb on - strand, within Dsui_2491at 2642.305 kb on + strand, within Dsui_2491at 2642.647 kb on + strandat 2642.680 kb on + strandat 2642.726 kb on - strandat 2642.772 kb on + strandat 2642.785 kb on + strandat 2642.793 kb on - strandat 2642.892 kb on + strandat 2642.900 kb on - strandat 2643.011 kb on - strand, within Dsui_2492at 2643.011 kb on - strand, within Dsui_2492at 2643.179 kb on + strandat 2643.182 kb on - strand, within Dsui_2492at 2643.224 kb on - strand, within Dsui_2492at 2643.373 kb on + strand, within Dsui_2492at 2643.381 kb on - strand, within Dsui_2492at 2643.463 kb on + strand, within Dsui_2492at 2643.525 kb on + strandat 2643.533 kb on + strandat 2643.533 kb on + strandat 2643.554 kb on + strandat 2643.563 kb on - strandat 2643.730 kb on + strandat 2643.733 kb on - strandat 2643.738 kb on - strandat 2643.834 kb on - strand, within Dsui_2493at 2643.845 kb on + strand, within Dsui_2493at 2643.845 kb on + strand, within Dsui_2493at 2643.884 kb on + strand, within Dsui_2493at 2643.892 kb on - strand, within Dsui_2493at 2643.910 kb on + strand, within Dsui_2493at 2643.963 kb on + strandat 2643.970 kb on + strand, within Dsui_2493at 2643.971 kb on - strand, within Dsui_2493at 2644.060 kb on - strand, within Dsui_2493at 2644.084 kb on - strand, within Dsui_2493at 2644.098 kb on - strand, within Dsui_2493at 2644.210 kb on + strandat 2644.269 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor
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2,641,931 - Dsui_2491 0.67 +0.6
2,641,950 + +1.4
2,642,064 - Dsui_2491 0.71 -0.4
2,642,081 - Dsui_2491 0.72 -2.8
2,642,109 - Dsui_2491 0.73 +0.5
2,642,122 + Dsui_2491 0.73 +0.7
2,642,130 - Dsui_2491 0.73 -0.5
2,642,131 - Dsui_2491 0.74 +0.3
2,642,133 + Dsui_2491 0.74 -0.7
2,642,144 + Dsui_2491 0.74 -2.0
2,642,298 - Dsui_2491 0.79 +0.2
2,642,305 + Dsui_2491 0.79 -0.2
2,642,647 + -0.4
2,642,680 + -0.6
2,642,726 - -0.2
2,642,772 + +0.4
2,642,785 + +0.1
2,642,793 - +0.4
2,642,892 + -0.4
2,642,900 - -0.5
2,643,011 - Dsui_2492 0.13 +1.4
2,643,011 - Dsui_2492 0.13 +1.0
2,643,179 + +0.8
2,643,182 - Dsui_2492 0.42 -0.2
2,643,224 - Dsui_2492 0.48 +0.3
2,643,373 + Dsui_2492 0.73 +0.4
2,643,381 - Dsui_2492 0.74 +1.3
2,643,463 + Dsui_2492 0.88 -0.8
2,643,525 + -0.3
2,643,533 + +1.4
2,643,533 + +1.7
2,643,554 + +1.0
2,643,563 - +0.7
2,643,730 + +0.3
2,643,733 - -0.4
2,643,738 - +0.9
2,643,834 - Dsui_2493 0.23 +0.1
2,643,845 + Dsui_2493 0.26 +0.0
2,643,845 + Dsui_2493 0.26 +0.0
2,643,884 + Dsui_2493 0.35 +0.1
2,643,892 - Dsui_2493 0.37 +1.5
2,643,910 + Dsui_2493 0.41 -0.6
2,643,963 + -0.4
2,643,970 + Dsui_2493 0.54 +0.8
2,643,971 - Dsui_2493 0.55 +0.4
2,644,060 - Dsui_2493 0.75 +0.8
2,644,084 - Dsui_2493 0.81 +0.4
2,644,098 - Dsui_2493 0.84 -0.0
2,644,210 + +0.4
2,644,269 + -1.3

Or see this region's nucleotide sequence