Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2250 and Dsui_2251 are separated by 92 nucleotides Dsui_2251 and Dsui_2252 are separated by 18 nucleotides
Dsui_2250: Dsui_2250 - putative domain HDIG-containing protein, at 2,397,320 to 2,398,582
_2250
Dsui_2251: Dsui_2251 - signal transduction histidine kinase, at 2,398,675 to 2,400,147
_2251
Dsui_2252: Dsui_2252 - transcriptional regulator with HTH domain and aminotransferase domain, at 2,400,166 to 2,401,707
_2252
Position (kb)
2398
2399
2400
2401 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2397.999 kb on + strand, within Dsui_2250 at 2398.056 kb on - strand at 2398.157 kb on + strand at 2398.251 kb on + strand, within Dsui_2250 at 2398.260 kb on - strand at 2398.342 kb on + strand at 2398.432 kb on - strand at 2398.469 kb on - strand at 2398.596 kb on + strand at 2398.610 kb on + strand at 2398.611 kb on + strand at 2398.713 kb on + strand at 2399.148 kb on + strand at 2399.258 kb on - strand, within Dsui_2251 at 2399.297 kb on + strand at 2399.525 kb on - strand, within Dsui_2251 at 2399.572 kb on - strand at 2399.612 kb on + strand, within Dsui_2251 at 2399.618 kb on + strand at 2399.709 kb on + strand, within Dsui_2251 at 2399.779 kb on - strand at 2399.808 kb on + strand, within Dsui_2251 at 2399.876 kb on + strand at 2399.978 kb on + strand, within Dsui_2251 at 2399.982 kb on - strand, within Dsui_2251 at 2399.983 kb on - strand, within Dsui_2251 at 2400.132 kb on - strand at 2400.137 kb on - strand at 2400.141 kb on + strand at 2400.149 kb on - strand at 2400.149 kb on - strand at 2400.283 kb on - strand at 2400.290 kb on + strand at 2400.507 kb on - strand, within Dsui_2252 at 2400.587 kb on + strand at 2400.617 kb on - strand, within Dsui_2252 at 2400.630 kb on + strand at 2400.687 kb on + strand, within Dsui_2252 at 2400.812 kb on - strand, within Dsui_2252 at 2400.947 kb on - strand, within Dsui_2252 at 2401.025 kb on - strand, within Dsui_2252 at 2401.100 kb on + strand, within Dsui_2252
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,397,999 + Dsui_2250 0.54 +0.6 2,398,056 - +2.2 2,398,157 + +2.2 2,398,251 + Dsui_2250 0.74 -1.2 2,398,260 - +2.2 2,398,342 + -0.4 2,398,432 - +0.2 2,398,469 - +0.2 2,398,596 + +1.0 2,398,610 + +1.6 2,398,611 + +1.9 2,398,713 + -0.2 2,399,148 + +0.6 2,399,258 - Dsui_2251 0.40 -1.1 2,399,297 + +2.2 2,399,525 - Dsui_2251 0.58 +1.0 2,399,572 - +2.2 2,399,612 + Dsui_2251 0.64 -0.2 2,399,618 + -0.6 2,399,709 + Dsui_2251 0.70 +0.2 2,399,779 - +2.2 2,399,808 + Dsui_2251 0.77 -0.4 2,399,876 + +2.2 2,399,978 + Dsui_2251 0.88 -0.9 2,399,982 - Dsui_2251 0.89 +0.6 2,399,983 - Dsui_2251 0.89 -0.7 2,400,132 - -0.6 2,400,137 - -0.4 2,400,141 + +0.2 2,400,149 - +1.2 2,400,149 - +0.9 2,400,283 - +0.5 2,400,290 + +0.8 2,400,507 - Dsui_2252 0.22 +0.6 2,400,587 + +0.2 2,400,617 - Dsui_2252 0.29 +0.8 2,400,630 + +1.2 2,400,687 + Dsui_2252 0.34 -0.2 2,400,812 - Dsui_2252 0.42 -0.9 2,400,947 - Dsui_2252 0.51 -0.4 2,401,025 - Dsui_2252 0.56 -0.7 2,401,100 + Dsui_2252 0.61 +3.8
Or see this region's nucleotide sequence