Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2043 and Dsui_2044 are separated by 262 nucleotides Dsui_2044 and Dsui_2045 are separated by 150 nucleotides Dsui_2045 and Dsui_2046 are separated by 40 nucleotides
Dsui_2043: Dsui_2043 - cysteine synthase, at 2,162,119 to 2,163,624
_2043
Dsui_2044: Dsui_2044 - Rhodanese-related sulfurtransferase, at 2,163,887 to 2,164,660
_2044
Dsui_2045: Dsui_2045 - hypothetical protein, at 2,164,811 to 2,165,128
_2045
Dsui_2046: Dsui_2046 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 2,165,169 to 2,166,848
_2046
Position (kb)
2163
2164
2165 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2163.094 kb on + strand at 2163.146 kb on - strand, within Dsui_2043 at 2163.206 kb on - strand at 2163.228 kb on + strand at 2163.249 kb on + strand at 2163.253 kb on - strand, within Dsui_2043 at 2163.305 kb on - strand at 2163.430 kb on - strand, within Dsui_2043 at 2163.463 kb on - strand, within Dsui_2043 at 2163.473 kb on - strand, within Dsui_2043 at 2163.628 kb on + strand at 2163.628 kb on + strand at 2163.646 kb on + strand at 2163.647 kb on + strand at 2163.647 kb on + strand at 2163.647 kb on + strand at 2163.655 kb on - strand at 2163.845 kb on + strand at 2163.845 kb on + strand at 2163.853 kb on - strand at 2163.973 kb on + strand, within Dsui_2044 at 2164.025 kb on - strand, within Dsui_2044 at 2164.072 kb on - strand at 2164.075 kb on + strand, within Dsui_2044 at 2164.089 kb on + strand at 2164.114 kb on - strand at 2164.174 kb on + strand, within Dsui_2044 at 2164.259 kb on - strand at 2164.409 kb on + strand, within Dsui_2044 at 2164.761 kb on + strand at 2164.791 kb on + strand at 2164.796 kb on + strand at 2164.796 kb on + strand at 2164.796 kb on + strand at 2164.796 kb on + strand at 2164.796 kb on + strand at 2164.804 kb on - strand at 2164.869 kb on + strand at 2164.893 kb on - strand at 2164.950 kb on + strand, within Dsui_2045 at 2165.021 kb on + strand, within Dsui_2045 at 2165.047 kb on - strand, within Dsui_2045 at 2165.066 kb on + strand, within Dsui_2045 at 2165.076 kb on + strand, within Dsui_2045 at 2165.265 kb on + strand at 2165.317 kb on + strand at 2165.382 kb on + strand, within Dsui_2046 at 2165.590 kb on + strand at 2165.638 kb on - strand at 2165.640 kb on + strand at 2165.648 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,163,094 + +1.3 2,163,146 - Dsui_2043 0.68 -0.3 2,163,206 - -0.5 2,163,228 + +0.7 2,163,249 + +0.7 2,163,253 - Dsui_2043 0.75 -0.0 2,163,305 - +1.3 2,163,430 - Dsui_2043 0.87 -1.4 2,163,463 - Dsui_2043 0.89 -0.3 2,163,473 - Dsui_2043 0.90 +0.1 2,163,628 + +0.7 2,163,628 + +0.7 2,163,646 + +2.3 2,163,647 + +0.7 2,163,647 + +1.3 2,163,647 + +0.2 2,163,655 - +2.3 2,163,845 + +0.7 2,163,845 + +2.3 2,163,853 - +1.9 2,163,973 + Dsui_2044 0.11 +1.9 2,164,025 - Dsui_2044 0.18 +0.3 2,164,072 - +2.3 2,164,075 + Dsui_2044 0.24 +0.7 2,164,089 + +0.7 2,164,114 - +1.3 2,164,174 + Dsui_2044 0.37 +0.2 2,164,259 - +1.3 2,164,409 + Dsui_2044 0.67 +0.1 2,164,761 + +2.9 2,164,791 + -0.1 2,164,796 + +0.2 2,164,796 + +0.2 2,164,796 + +1.3 2,164,796 + -1.7 2,164,796 + -1.0 2,164,804 - +1.3 2,164,869 + +0.3 2,164,893 - +1.3 2,164,950 + Dsui_2045 0.44 -0.5 2,165,021 + Dsui_2045 0.66 +0.8 2,165,047 - Dsui_2045 0.74 +1.4 2,165,066 + Dsui_2045 0.80 -0.7 2,165,076 + Dsui_2045 0.83 -1.1 2,165,265 + -0.0 2,165,317 + -1.0 2,165,382 + Dsui_2046 0.13 +0.5 2,165,590 + +1.3 2,165,638 - +0.3 2,165,640 + +1.7 2,165,648 - +1.3
Or see this region's nucleotide sequence