Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1746 and Dsui_1747 overlap by 4 nucleotides Dsui_1747 and Dsui_1748 are separated by 202 nucleotides Dsui_1748 and Dsui_1749 overlap by 8 nucleotides
Dsui_1746: Dsui_1746 - flagellar biosynthetic protein FliP, at 1,834,106 to 1,834,858
_1746
Dsui_1747: Dsui_1747 - flagellar biosynthetic protein FliO, at 1,834,855 to 1,835,253
_1747
Dsui_1748: Dsui_1748 - flagellar motor switch protein FliN, at 1,835,456 to 1,835,893
_1748
Dsui_1749: Dsui_1749 - flagellar motor switch protein FliM, at 1,835,886 to 1,836,890
_1749
Position (kb)
1835
1836 Strain fitness (log2 ratio)
-2
-1
0
1 at 1834.515 kb on + strand, within Dsui_1746 at 1834.515 kb on + strand, within Dsui_1746 at 1834.515 kb on + strand, within Dsui_1746 at 1834.523 kb on - strand, within Dsui_1746 at 1834.523 kb on - strand, within Dsui_1746 at 1834.523 kb on - strand, within Dsui_1746 at 1834.726 kb on + strand, within Dsui_1746 at 1834.728 kb on + strand, within Dsui_1746 at 1834.734 kb on - strand, within Dsui_1746 at 1834.736 kb on - strand, within Dsui_1746 at 1834.785 kb on + strand at 1834.785 kb on + strand at 1834.789 kb on + strand at 1834.888 kb on - strand at 1834.916 kb on + strand, within Dsui_1747 at 1834.937 kb on + strand, within Dsui_1747 at 1834.945 kb on - strand, within Dsui_1747 at 1834.971 kb on - strand, within Dsui_1747 at 1835.096 kb on - strand, within Dsui_1747 at 1835.173 kb on + strand, within Dsui_1747 at 1835.188 kb on + strand, within Dsui_1747 at 1835.208 kb on - strand, within Dsui_1747 at 1835.222 kb on + strand at 1835.232 kb on + strand at 1835.304 kb on - strand at 1835.359 kb on + strand at 1835.372 kb on + strand at 1835.372 kb on + strand at 1835.372 kb on + strand at 1835.380 kb on - strand at 1835.567 kb on + strand, within Dsui_1748 at 1835.576 kb on + strand, within Dsui_1748 at 1835.621 kb on - strand, within Dsui_1748 at 1835.663 kb on + strand, within Dsui_1748 at 1835.693 kb on + strand, within Dsui_1748 at 1835.693 kb on - strand, within Dsui_1748 at 1835.734 kb on - strand, within Dsui_1748 at 1835.870 kb on - strand at 1835.889 kb on + strand at 1835.911 kb on + strand at 1835.911 kb on + strand at 1835.939 kb on + strand at 1836.023 kb on - strand, within Dsui_1749 at 1836.071 kb on - strand, within Dsui_1749 at 1836.091 kb on + strand, within Dsui_1749 at 1836.196 kb on + strand, within Dsui_1749 at 1836.196 kb on + strand, within Dsui_1749 at 1836.201 kb on - strand, within Dsui_1749 at 1836.204 kb on - strand, within Dsui_1749 at 1836.204 kb on - strand, within Dsui_1749 at 1836.232 kb on - strand, within Dsui_1749 at 1836.296 kb on - strand, within Dsui_1749 at 1836.428 kb on + strand, within Dsui_1749 at 1836.535 kb on - strand, within Dsui_1749 at 1836.543 kb on + strand, within Dsui_1749 at 1836.543 kb on + strand, within Dsui_1749 at 1836.543 kb on + strand, within Dsui_1749 at 1836.556 kb on - strand, within Dsui_1749 at 1836.556 kb on - strand, within Dsui_1749 at 1836.565 kb on + strand, within Dsui_1749 at 1836.589 kb on - strand, within Dsui_1749 at 1836.643 kb on - strand, within Dsui_1749 at 1836.679 kb on - strand, within Dsui_1749 at 1836.689 kb on - strand, within Dsui_1749 at 1836.725 kb on + strand, within Dsui_1749 at 1836.725 kb on + strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.766 kb on + strand, within Dsui_1749 at 1836.841 kb on + strand at 1836.841 kb on + strand at 1836.841 kb on + strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.879 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 1,834,515 + Dsui_1746 0.54 -0.6 1,834,515 + Dsui_1746 0.54 -1.3 1,834,515 + Dsui_1746 0.54 -0.6 1,834,523 - Dsui_1746 0.55 -1.0 1,834,523 - Dsui_1746 0.55 -1.7 1,834,523 - Dsui_1746 0.55 -0.8 1,834,726 + Dsui_1746 0.82 -1.7 1,834,728 + Dsui_1746 0.83 -1.6 1,834,734 - Dsui_1746 0.83 -0.5 1,834,736 - Dsui_1746 0.84 -0.3 1,834,785 + -1.2 1,834,785 + -0.1 1,834,789 + -1.4 1,834,888 - -1.1 1,834,916 + Dsui_1747 0.15 -0.4 1,834,937 + Dsui_1747 0.21 -0.1 1,834,945 - Dsui_1747 0.23 +0.0 1,834,971 - Dsui_1747 0.29 -0.5 1,835,096 - Dsui_1747 0.60 -0.8 1,835,173 + Dsui_1747 0.80 -1.6 1,835,188 + Dsui_1747 0.83 -1.1 1,835,208 - Dsui_1747 0.88 -2.5 1,835,222 + -0.9 1,835,232 + -0.8 1,835,304 - -0.5 1,835,359 + -1.0 1,835,372 + -1.0 1,835,372 + -1.2 1,835,372 + -1.2 1,835,380 - +1.4 1,835,567 + Dsui_1748 0.25 +0.8 1,835,576 + Dsui_1748 0.27 -1.1 1,835,621 - Dsui_1748 0.38 -1.0 1,835,663 + Dsui_1748 0.47 -1.6 1,835,693 + Dsui_1748 0.54 -0.7 1,835,693 - Dsui_1748 0.54 -0.8 1,835,734 - Dsui_1748 0.63 -1.1 1,835,870 - -0.9 1,835,889 + -0.5 1,835,911 + -0.7 1,835,911 + +0.5 1,835,939 + -1.8 1,836,023 - Dsui_1749 0.14 -0.5 1,836,071 - Dsui_1749 0.18 +0.5 1,836,091 + Dsui_1749 0.20 -1.4 1,836,196 + Dsui_1749 0.31 -1.2 1,836,196 + Dsui_1749 0.31 -0.3 1,836,201 - Dsui_1749 0.31 -0.8 1,836,204 - Dsui_1749 0.32 +0.1 1,836,204 - Dsui_1749 0.32 -1.1 1,836,232 - Dsui_1749 0.34 -0.8 1,836,296 - Dsui_1749 0.41 -0.8 1,836,428 + Dsui_1749 0.54 +0.4 1,836,535 - Dsui_1749 0.65 -0.9 1,836,543 + Dsui_1749 0.65 -1.9 1,836,543 + Dsui_1749 0.65 +0.4 1,836,543 + Dsui_1749 0.65 -0.8 1,836,556 - Dsui_1749 0.67 -1.0 1,836,556 - Dsui_1749 0.67 -0.7 1,836,565 + Dsui_1749 0.68 -1.5 1,836,589 - Dsui_1749 0.70 -0.5 1,836,643 - Dsui_1749 0.75 -0.1 1,836,679 - Dsui_1749 0.79 -0.9 1,836,689 - Dsui_1749 0.80 -1.6 1,836,725 + Dsui_1749 0.83 -1.3 1,836,725 + Dsui_1749 0.83 -1.0 1,836,733 - Dsui_1749 0.84 -1.1 1,836,733 - Dsui_1749 0.84 -2.0 1,836,733 - Dsui_1749 0.84 -1.0 1,836,733 - Dsui_1749 0.84 -0.3 1,836,733 - Dsui_1749 0.84 -0.4 1,836,733 - Dsui_1749 0.84 -0.7 1,836,733 - Dsui_1749 0.84 -0.9 1,836,766 + Dsui_1749 0.88 -0.8 1,836,841 + -1.4 1,836,841 + -0.5 1,836,841 + -1.0 1,836,849 - -0.2 1,836,849 - -0.7 1,836,849 - +0.3 1,836,849 - -1.3 1,836,849 - +0.1 1,836,849 - -0.4 1,836,849 - +0.4 1,836,879 + -1.7
Or see this region's nucleotide sequence