Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1351 and Dsui_1352 are separated by 83 nucleotides Dsui_1352 and Dsui_1353 are separated by 324 nucleotides
Dsui_1351: Dsui_1351 - DNA/RNA helicase, superfamily II, at 1,406,162 to 1,408,087
_1351
Dsui_1352: Dsui_1352 - acyl dehydratase, at 1,408,171 to 1,408,602
_1352
Dsui_1353: Dsui_1353 - flagellar capping protein, at 1,408,927 to 1,409,817
_1353
Position (kb)
1408
1409 Strain fitness (log2 ratio)
-1
0
1
2 at 1407.354 kb on + strand, within Dsui_1351 at 1407.495 kb on + strand, within Dsui_1351 at 1407.498 kb on - strand, within Dsui_1351 at 1407.522 kb on + strand, within Dsui_1351 at 1407.759 kb on + strand, within Dsui_1351 at 1407.768 kb on + strand, within Dsui_1351 at 1407.789 kb on + strand, within Dsui_1351 at 1407.817 kb on + strand, within Dsui_1351 at 1407.976 kb on - strand at 1408.088 kb on + strand at 1408.328 kb on + strand, within Dsui_1352 at 1408.361 kb on - strand, within Dsui_1352 at 1408.479 kb on + strand, within Dsui_1352 at 1408.481 kb on + strand, within Dsui_1352 at 1408.487 kb on - strand, within Dsui_1352 at 1408.489 kb on - strand, within Dsui_1352 at 1408.569 kb on + strand at 1408.675 kb on + strand at 1408.836 kb on + strand at 1408.921 kb on + strand at 1409.000 kb on + strand at 1409.008 kb on - strand at 1409.103 kb on + strand, within Dsui_1353 at 1409.139 kb on + strand at 1409.156 kb on + strand, within Dsui_1353 at 1409.230 kb on - strand, within Dsui_1353 at 1409.273 kb on + strand, within Dsui_1353 at 1409.278 kb on + strand, within Dsui_1353 at 1409.286 kb on - strand, within Dsui_1353 at 1409.297 kb on - strand at 1409.388 kb on + strand, within Dsui_1353 at 1409.438 kb on + strand, within Dsui_1353 at 1409.539 kb on + strand, within Dsui_1353
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 1,407,354 + Dsui_1351 0.62 +0.3 1,407,495 + Dsui_1351 0.69 -0.5 1,407,498 - Dsui_1351 0.69 -1.2 1,407,522 + Dsui_1351 0.71 +0.3 1,407,759 + Dsui_1351 0.83 +0.1 1,407,768 + Dsui_1351 0.83 +1.7 1,407,789 + Dsui_1351 0.84 +0.7 1,407,817 + Dsui_1351 0.86 +1.0 1,407,976 - +0.7 1,408,088 + +0.6 1,408,328 + Dsui_1352 0.36 -0.3 1,408,361 - Dsui_1352 0.44 -0.3 1,408,479 + Dsui_1352 0.71 +0.9 1,408,481 + Dsui_1352 0.72 -1.0 1,408,487 - Dsui_1352 0.73 -0.2 1,408,489 - Dsui_1352 0.74 +1.1 1,408,569 + +0.1 1,408,675 + +0.8 1,408,836 + +1.9 1,408,921 + +1.4 1,409,000 + -0.0 1,409,008 - +0.5 1,409,103 + Dsui_1353 0.20 +0.3 1,409,139 + -0.3 1,409,156 + Dsui_1353 0.26 -0.4 1,409,230 - Dsui_1353 0.34 -0.9 1,409,273 + Dsui_1353 0.39 +0.4 1,409,278 + Dsui_1353 0.39 +1.9 1,409,286 - Dsui_1353 0.40 +0.6 1,409,297 - +0.7 1,409,388 + Dsui_1353 0.52 +0.7 1,409,438 + Dsui_1353 0.57 +1.7 1,409,539 + Dsui_1353 0.69 +1.7
Or see this region's nucleotide sequence