Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1022 and Dsui_1023 overlap by 4 nucleotides Dsui_1023 and Dsui_1024 are separated by 13 nucleotides Dsui_1024 and Dsui_1025 are separated by 170 nucleotides
Dsui_1022: Dsui_1022 - cell division protein, at 1,054,727 to 1,055,632
_1022
Dsui_1023: Dsui_1023 - putative ATPase involved in cell division, at 1,055,629 to 1,056,309
_1023
Dsui_1024: Dsui_1024 - signal recognition particle-docking protein FtsY, at 1,056,323 to 1,057,327
_1024
Dsui_1025: Dsui_1025 - putative Zn-dependent peptidase, at 1,057,498 to 1,058,865
_1025
Position (kb)
1056
1057
1058 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1055.442 kb on - strand, within Dsui_1022 at 1055.487 kb on - strand, within Dsui_1022 at 1055.527 kb on - strand, within Dsui_1022 at 1055.556 kb on + strand at 1055.564 kb on - strand at 1055.639 kb on + strand at 1055.765 kb on + strand, within Dsui_1023 at 1055.765 kb on + strand, within Dsui_1023 at 1055.765 kb on + strand, within Dsui_1023 at 1055.765 kb on + strand, within Dsui_1023 at 1055.773 kb on - strand, within Dsui_1023 at 1055.773 kb on - strand, within Dsui_1023 at 1055.778 kb on - strand, within Dsui_1023 at 1055.848 kb on + strand, within Dsui_1023 at 1055.856 kb on - strand, within Dsui_1023 at 1055.883 kb on - strand, within Dsui_1023 at 1055.912 kb on + strand, within Dsui_1023 at 1055.936 kb on + strand, within Dsui_1023 at 1055.941 kb on + strand, within Dsui_1023 at 1055.973 kb on + strand, within Dsui_1023 at 1056.004 kb on - strand, within Dsui_1023 at 1056.073 kb on + strand, within Dsui_1023 at 1056.124 kb on + strand, within Dsui_1023 at 1056.129 kb on + strand at 1056.139 kb on + strand, within Dsui_1023 at 1056.170 kb on + strand, within Dsui_1023 at 1056.188 kb on - strand, within Dsui_1023 at 1056.261 kb on - strand at 1056.283 kb on + strand at 1056.283 kb on - strand at 1056.291 kb on - strand at 1056.314 kb on + strand at 1056.348 kb on - strand at 1057.377 kb on - strand at 1057.381 kb on - strand at 1057.595 kb on + strand at 1057.652 kb on + strand, within Dsui_1025 at 1057.652 kb on + strand, within Dsui_1025 at 1057.942 kb on + strand, within Dsui_1025 at 1057.983 kb on + strand, within Dsui_1025 at 1058.020 kb on + strand, within Dsui_1025 at 1058.072 kb on + strand, within Dsui_1025 at 1058.072 kb on - strand, within Dsui_1025 at 1058.126 kb on + strand, within Dsui_1025 at 1058.228 kb on - strand at 1058.291 kb on - strand, within Dsui_1025 at 1058.317 kb on - strand, within Dsui_1025
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 1,055,442 - Dsui_1022 0.79 -0.4 1,055,487 - Dsui_1022 0.84 +1.8 1,055,527 - Dsui_1022 0.88 -1.9 1,055,556 + -0.4 1,055,564 - -1.2 1,055,639 + +0.1 1,055,765 + Dsui_1023 0.20 +0.2 1,055,765 + Dsui_1023 0.20 -2.9 1,055,765 + Dsui_1023 0.20 -0.4 1,055,765 + Dsui_1023 0.20 -0.7 1,055,773 - Dsui_1023 0.21 -1.9 1,055,773 - Dsui_1023 0.21 -3.0 1,055,778 - Dsui_1023 0.22 -0.9 1,055,848 + Dsui_1023 0.32 -2.1 1,055,856 - Dsui_1023 0.33 -1.5 1,055,883 - Dsui_1023 0.37 -1.4 1,055,912 + Dsui_1023 0.42 -0.5 1,055,936 + Dsui_1023 0.45 -0.0 1,055,941 + Dsui_1023 0.46 -0.6 1,055,973 + Dsui_1023 0.51 -1.4 1,056,004 - Dsui_1023 0.55 -0.8 1,056,073 + Dsui_1023 0.65 -0.4 1,056,124 + Dsui_1023 0.73 +0.9 1,056,129 + +0.5 1,056,139 + Dsui_1023 0.75 -0.4 1,056,170 + Dsui_1023 0.79 -1.2 1,056,188 - Dsui_1023 0.82 -0.2 1,056,261 - -1.2 1,056,283 + -0.8 1,056,283 - -0.9 1,056,291 - -1.1 1,056,314 + +0.1 1,056,348 - -0.7 1,057,377 - -1.1 1,057,381 - -0.5 1,057,595 + -1.5 1,057,652 + Dsui_1025 0.11 -2.7 1,057,652 + Dsui_1025 0.11 -1.4 1,057,942 + Dsui_1025 0.32 -1.1 1,057,983 + Dsui_1025 0.35 -1.2 1,058,020 + Dsui_1025 0.38 -0.6 1,058,072 + Dsui_1025 0.42 -0.9 1,058,072 - Dsui_1025 0.42 -1.0 1,058,126 + Dsui_1025 0.46 -0.7 1,058,228 - +1.3 1,058,291 - Dsui_1025 0.58 +1.2 1,058,317 - Dsui_1025 0.60 -0.5
Or see this region's nucleotide sequence