Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0845 and Dsui_0846 are separated by 273 nucleotides Dsui_0846 and Dsui_0847 overlap by 4 nucleotides Dsui_0847 and Dsui_0848 are separated by 4 nucleotides
Dsui_0845: Dsui_0845 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 861,297 to 862,994
_0845
Dsui_0846: Dsui_0846 - glucose-inhibited division protein A, at 863,268 to 865,142
_0846
Dsui_0847: Dsui_0847 - 16S rRNA (guanine(527)-N(7))-methyltransferase GidB, at 865,139 to 865,780
_0847
Dsui_0848: Dsui_0848 - ATPase involved in chromosome partitioning, at 865,785 to 866,567
_0848
Position (kb) 863
864
865
866 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 862.283 kb on - strand, within Dsui_0845 at 862.296 kb on - strand, within Dsui_0845 at 862.306 kb on + strand, within Dsui_0845 at 862.315 kb on + strand, within Dsui_0845 at 862.370 kb on - strand, within Dsui_0845 at 862.384 kb on - strand, within Dsui_0845 at 862.426 kb on + strand, within Dsui_0845 at 862.441 kb on + strand, within Dsui_0845 at 862.467 kb on + strand, within Dsui_0845 at 862.467 kb on + strand, within Dsui_0845 at 862.469 kb on + strand at 862.539 kb on + strand, within Dsui_0845 at 862.589 kb on - strand, within Dsui_0845 at 862.592 kb on + strand, within Dsui_0845 at 862.623 kb on - strand, within Dsui_0845 at 862.645 kb on - strand, within Dsui_0845 at 862.688 kb on + strand, within Dsui_0845 at 862.698 kb on - strand, within Dsui_0845 at 862.698 kb on - strand, within Dsui_0845 at 862.700 kb on + strand, within Dsui_0845 at 862.743 kb on - strand, within Dsui_0845 at 862.743 kb on - strand, within Dsui_0845 at 862.795 kb on - strand, within Dsui_0845 at 862.928 kb on + strand at 862.929 kb on - strand at 862.938 kb on - strand at 862.942 kb on + strand at 863.041 kb on - strand at 863.068 kb on + strand at 863.206 kb on + strand at 863.206 kb on + strand at 863.206 kb on + strand at 863.206 kb on + strand at 863.206 kb on + strand at 863.214 kb on - strand at 863.779 kb on - strand at 864.061 kb on + strand, within Dsui_0846 at 864.268 kb on + strand, within Dsui_0846 at 864.385 kb on - strand at 864.455 kb on + strand, within Dsui_0846 at 864.523 kb on + strand, within Dsui_0846 at 864.704 kb on + strand, within Dsui_0846 at 864.725 kb on + strand, within Dsui_0846 at 864.801 kb on + strand, within Dsui_0846 at 864.816 kb on + strand, within Dsui_0846 at 864.944 kb on + strand, within Dsui_0846 at 865.143 kb on - strand at 865.186 kb on + strand at 865.196 kb on + strand at 865.196 kb on + strand at 865.216 kb on + strand, within Dsui_0847 at 865.216 kb on + strand, within Dsui_0847 at 865.216 kb on + strand, within Dsui_0847 at 865.216 kb on + strand, within Dsui_0847 at 865.224 kb on - strand, within Dsui_0847 at 865.233 kb on + strand, within Dsui_0847 at 865.275 kb on - strand, within Dsui_0847 at 865.282 kb on + strand, within Dsui_0847 at 865.291 kb on + strand, within Dsui_0847 at 865.299 kb on - strand, within Dsui_0847 at 865.299 kb on - strand, within Dsui_0847 at 865.313 kb on - strand, within Dsui_0847 at 865.565 kb on + strand, within Dsui_0847 at 865.608 kb on + strand, within Dsui_0847 at 865.608 kb on + strand, within Dsui_0847 at 865.712 kb on + strand, within Dsui_0847 at 865.712 kb on + strand, within Dsui_0847 at 865.775 kb on + strand at 865.790 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 862,283 - Dsui_0845 0.58 -0.2 862,296 - Dsui_0845 0.59 -0.3 862,306 + Dsui_0845 0.59 +0.7 862,315 + Dsui_0845 0.60 -0.3 862,370 - Dsui_0845 0.63 +0.2 862,384 - Dsui_0845 0.64 -0.8 862,426 + Dsui_0845 0.66 +0.1 862,441 + Dsui_0845 0.67 -0.2 862,467 + Dsui_0845 0.69 -1.3 862,467 + Dsui_0845 0.69 -0.6 862,469 + +1.2 862,539 + Dsui_0845 0.73 -0.4 862,589 - Dsui_0845 0.76 +1.2 862,592 + Dsui_0845 0.76 -0.0 862,623 - Dsui_0845 0.78 +0.4 862,645 - Dsui_0845 0.79 +0.1 862,688 + Dsui_0845 0.82 -0.2 862,698 - Dsui_0845 0.83 -0.4 862,698 - Dsui_0845 0.83 +0.8 862,700 + Dsui_0845 0.83 +0.2 862,743 - Dsui_0845 0.85 +0.1 862,743 - Dsui_0845 0.85 +0.0 862,795 - Dsui_0845 0.88 -0.7 862,928 + -0.9 862,929 - -0.6 862,938 - +0.2 862,942 + -0.2 863,041 - +1.2 863,068 + -0.2 863,206 + -0.1 863,206 + +0.1 863,206 + -0.8 863,206 + -0.7 863,206 + -0.7 863,214 - -0.3 863,779 - -0.6 864,061 + Dsui_0846 0.42 +0.4 864,268 + Dsui_0846 0.53 -0.6 864,385 - +0.7 864,455 + Dsui_0846 0.63 -1.0 864,523 + Dsui_0846 0.67 -2.1 864,704 + Dsui_0846 0.77 -0.3 864,725 + Dsui_0846 0.78 -1.2 864,801 + Dsui_0846 0.82 -1.1 864,816 + Dsui_0846 0.83 -1.4 864,944 + Dsui_0846 0.89 +0.3 865,143 - -0.5 865,186 + +0.2 865,196 + -0.3 865,196 + -0.7 865,216 + Dsui_0847 0.12 -0.0 865,216 + Dsui_0847 0.12 -0.9 865,216 + Dsui_0847 0.12 +0.3 865,216 + Dsui_0847 0.12 +0.6 865,224 - Dsui_0847 0.13 -1.0 865,233 + Dsui_0847 0.15 -0.7 865,275 - Dsui_0847 0.21 -2.7 865,282 + Dsui_0847 0.22 +0.2 865,291 + Dsui_0847 0.24 +0.0 865,299 - Dsui_0847 0.25 -2.3 865,299 - Dsui_0847 0.25 -1.6 865,313 - Dsui_0847 0.27 -2.0 865,565 + Dsui_0847 0.66 -0.1 865,608 + Dsui_0847 0.73 +0.2 865,608 + Dsui_0847 0.73 -0.9 865,712 + Dsui_0847 0.89 -1.7 865,712 + Dsui_0847 0.89 +0.9 865,775 + -2.8 865,790 + -2.0
Or see this region's nucleotide sequence